Gene : Solyc10g078780.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR33493:SF2 - LATE EMBRYOGENESIS ABUNDANT PROTEIN 4-5 Description:  Seed maturation protein LEA 4 (AHRD V1 *-*- Q9FNW7_GLYTO); contains Interpro domain(s) IPR005513 Late embryogenesis abundant (LEA) group 1
Genomic Order:  1847 Name:  ? Solyc10g078780.1
Secondary Identifier:  ? PAC:36155915
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc10g078780.1 0.5kb upstream 0.5kb upstream 1555 true SL2.50ch10: 60488097-60489651 Solanum lycopersicum
Solyc10g078780.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch10: 60489152-60489651 Solanum lycopersicum
Solyc10g078780.1 0.5kb downstream 0.5kb downstream 1555 true SL2.50ch10: 60487597-60489151 Solanum lycopersicum
Solyc10g078780.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch10: 60487597-60488096 Solanum lycopersicum
Solyc10g078780.1 1.0kb upstream 1.0kb upstream 2055 true SL2.50ch10: 60488097-60490151 Solanum lycopersicum
Solyc10g078780.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch10: 60489152-60490151 Solanum lycopersicum
Solyc10g078780.1 1.0kb downstream 1.0kb downstream 2055 true SL2.50ch10: 60487097-60489151 Solanum lycopersicum
Solyc10g078780.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch10: 60487097-60488096 Solanum lycopersicum
Solyc10g078780.1 2.0kb upstream 2.0kb upstream 3055 true SL2.50ch10: 60488097-60491151 Solanum lycopersicum
Solyc10g078780.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch10: 60489152-60491151 Solanum lycopersicum
Solyc10g078780.1 2.0kb downstream 2.0kb downstream 3055 true SL2.50ch10: 60486097-60489151 Solanum lycopersicum
Solyc10g078780.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch10: 60486097-60488096 Solanum lycopersicum
Solyc10g078780.1 5.0kb upstream 5.0kb upstream 6055 true SL2.50ch10: 60488097-60494151 Solanum lycopersicum
Solyc10g078780.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch10: 60489152-60494151 Solanum lycopersicum
Solyc10g078780.1 5.0kb downstream 5.0kb downstream 6055 true SL2.50ch10: 60483097-60489151 Solanum lycopersicum
Solyc10g078780.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch10: 60483097-60488096 Solanum lycopersicum
Solyc10g078780.1 10.0kb upstream 10.0kb upstream 11055 true SL2.50ch10: 60488097-60499151 Solanum lycopersicum
Solyc10g078780.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch10: 60489152-60499151 Solanum lycopersicum
Solyc10g078780.1 10.0kb downstream 10.0kb downstream 11055 true SL2.50ch10: 60478097-60489151 Solanum lycopersicum
Solyc10g078780.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch10: 60478097-60488096 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478379 5263 Asterids View MSA
123749159 5271 Pentapetalae View MSA
122794913 5272 Eudicot View MSA
122046443 5273 Angiosperm View MSA
121349982 5274 Embryophyte View MSA
123381528 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain