Gene : Solyc10g079720.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K01760 - cystathionine beta-lyase (metC) Description:  Cystathionine gamma-lyase (AHRD V1 ***- C1PDC6_BACCO); contains Interpro domain(s) IPR006238 Cystathionine beta-lyase, eukaryotic
Genomic Order:  1941 Name:  ? Solyc10g079720.1
Secondary Identifier:  ? PAC:36154472
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-6936 Solanum lycopersicum pathologic  
Slycopersicum PWY-702 Solanum lycopersicum pathologic  
Slycopersicum PWY-724 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc10g079720.1 0.5kb upstream 0.5kb upstream 7039 true SL2.50ch10: 61216367-61223405 Solanum lycopersicum
Solyc10g079720.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch10: 61222906-61223405 Solanum lycopersicum
Solyc10g079720.1 0.5kb downstream 0.5kb downstream 7039 true SL2.50ch10: 61215867-61222905 Solanum lycopersicum
Solyc10g079720.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch10: 61215867-61216366 Solanum lycopersicum
Solyc10g079720.1 1.0kb upstream 1.0kb upstream 7539 true SL2.50ch10: 61216367-61223905 Solanum lycopersicum
Solyc10g079720.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch10: 61222906-61223905 Solanum lycopersicum
Solyc10g079720.1 1.0kb downstream 1.0kb downstream 7539 true SL2.50ch10: 61215367-61222905 Solanum lycopersicum
Solyc10g079720.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch10: 61215367-61216366 Solanum lycopersicum
Solyc10g079720.1 2.0kb upstream 2.0kb upstream 8539 true SL2.50ch10: 61216367-61224905 Solanum lycopersicum
Solyc10g079720.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch10: 61222906-61224905 Solanum lycopersicum
Solyc10g079720.1 2.0kb downstream 2.0kb downstream 8539 true SL2.50ch10: 61214367-61222905 Solanum lycopersicum
Solyc10g079720.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch10: 61214367-61216366 Solanum lycopersicum
Solyc10g079720.1 5.0kb upstream 5.0kb upstream 11539 true SL2.50ch10: 61216367-61227905 Solanum lycopersicum
Solyc10g079720.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch10: 61222906-61227905 Solanum lycopersicum
Solyc10g079720.1 5.0kb downstream 5.0kb downstream 11539 true SL2.50ch10: 61211367-61222905 Solanum lycopersicum
Solyc10g079720.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch10: 61211367-61216366 Solanum lycopersicum
Solyc10g079720.1 10.0kb upstream 10.0kb upstream 16539 true SL2.50ch10: 61216367-61232905 Solanum lycopersicum
Solyc10g079720.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch10: 61222906-61232905 Solanum lycopersicum
Solyc10g079720.1 10.0kb downstream 10.0kb downstream 16539 true SL2.50ch10: 61206367-61222905 Solanum lycopersicum
Solyc10g079720.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch10: 61206367-61216366 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041211 5273 Angiosperm View MSA
121473643 5263 Asterids View MSA
123751787 5271 Pentapetalae View MSA
122792966 5272 Eudicot View MSA
121349443 5274 Embryophyte View MSA
123424610 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain