Gene : Solyc10g079370.1 S. lycopersicum ITAG2.4
Defline:  (1 of 3) K03124 - transcription initiation factor TFIIB (TFIIB, GTF2B, SUA7, tfb) Description:  Transcription initiation factor IIB-2 (AHRD V1 ***- D7L8X6_ARALY); contains Interpro domain(s) IPR000812 Transcription factor TFIIB related
Genomic Order:  1906 Name:  ? Solyc10g079370.1
Secondary Identifier:  ? PAC:36156446
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc10g079370.1 0.5kb upstream 0.5kb upstream 3641 true SL2.50ch10: 60914785-60918425 Solanum lycopersicum
Solyc10g079370.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch10: 60917926-60918425 Solanum lycopersicum
Solyc10g079370.1 0.5kb downstream 0.5kb downstream 3641 true SL2.50ch10: 60914285-60917925 Solanum lycopersicum
Solyc10g079370.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch10: 60914285-60914784 Solanum lycopersicum
Solyc10g079370.1 1.0kb upstream 1.0kb upstream 4141 true SL2.50ch10: 60914785-60918925 Solanum lycopersicum
Solyc10g079370.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch10: 60917926-60918925 Solanum lycopersicum
Solyc10g079370.1 1.0kb downstream 1.0kb downstream 4141 true SL2.50ch10: 60913785-60917925 Solanum lycopersicum
Solyc10g079370.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch10: 60913785-60914784 Solanum lycopersicum
Solyc10g079370.1 2.0kb upstream 2.0kb upstream 5141 true SL2.50ch10: 60914785-60919925 Solanum lycopersicum
Solyc10g079370.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch10: 60917926-60919925 Solanum lycopersicum
Solyc10g079370.1 2.0kb downstream 2.0kb downstream 5141 true SL2.50ch10: 60912785-60917925 Solanum lycopersicum
Solyc10g079370.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch10: 60912785-60914784 Solanum lycopersicum
Solyc10g079370.1 5.0kb upstream 5.0kb upstream 8141 true SL2.50ch10: 60914785-60922925 Solanum lycopersicum
Solyc10g079370.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch10: 60917926-60922925 Solanum lycopersicum
Solyc10g079370.1 5.0kb downstream 5.0kb downstream 8141 true SL2.50ch10: 60909785-60917925 Solanum lycopersicum
Solyc10g079370.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch10: 60909785-60914784 Solanum lycopersicum
Solyc10g079370.1 10.0kb upstream 10.0kb upstream 13141 true SL2.50ch10: 60914785-60927925 Solanum lycopersicum
Solyc10g079370.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch10: 60917926-60927925 Solanum lycopersicum
Solyc10g079370.1 10.0kb downstream 10.0kb downstream 13141 true SL2.50ch10: 60904785-60917925 Solanum lycopersicum
Solyc10g079370.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch10: 60904785-60914784 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121414589 5263 Asterids View MSA
123691146 5271 Pentapetalae View MSA
122724973 5272 Eudicot View MSA
122045994 5273 Angiosperm View MSA
121350308 5274 Embryophyte View MSA
123427568 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain