Gene : Solyc10g079250.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR22942:SF41 - DNA REPAIR PROTEIN RECA HOMOLOG 2, MITOCHONDRIAL Description:  Protein recA (AHRD V1 ***- Q0F3T6_9PROT); contains Interpro domain(s) IPR013765 RecA IPR003593 ATPase, AAA+ type, core
Genomic Order:  1894 Name:  ? Solyc10g079250.1
Secondary Identifier:  ? PAC:36154815
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc10g079250.1 0.5kb upstream 0.5kb upstream 5469 true SL2.50ch10: 60819887-60825355 Solanum lycopersicum
Solyc10g079250.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch10: 60824856-60825355 Solanum lycopersicum
Solyc10g079250.1 0.5kb downstream 0.5kb downstream 5469 true SL2.50ch10: 60819387-60824855 Solanum lycopersicum
Solyc10g079250.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch10: 60819387-60819886 Solanum lycopersicum
Solyc10g079250.1 1.0kb upstream 1.0kb upstream 5969 true SL2.50ch10: 60819887-60825855 Solanum lycopersicum
Solyc10g079250.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch10: 60824856-60825855 Solanum lycopersicum
Solyc10g079250.1 1.0kb downstream 1.0kb downstream 5969 true SL2.50ch10: 60818887-60824855 Solanum lycopersicum
Solyc10g079250.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch10: 60818887-60819886 Solanum lycopersicum
Solyc10g079250.1 2.0kb upstream 2.0kb upstream 6969 true SL2.50ch10: 60819887-60826855 Solanum lycopersicum
Solyc10g079250.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch10: 60824856-60826855 Solanum lycopersicum
Solyc10g079250.1 2.0kb downstream 2.0kb downstream 6969 true SL2.50ch10: 60817887-60824855 Solanum lycopersicum
Solyc10g079250.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch10: 60817887-60819886 Solanum lycopersicum
Solyc10g079250.1 5.0kb upstream 5.0kb upstream 9969 true SL2.50ch10: 60819887-60829855 Solanum lycopersicum
Solyc10g079250.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch10: 60824856-60829855 Solanum lycopersicum
Solyc10g079250.1 5.0kb downstream 5.0kb downstream 9969 true SL2.50ch10: 60814887-60824855 Solanum lycopersicum
Solyc10g079250.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch10: 60814887-60819886 Solanum lycopersicum
Solyc10g079250.1 10.0kb upstream 10.0kb upstream 14969 true SL2.50ch10: 60819887-60834855 Solanum lycopersicum
Solyc10g079250.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch10: 60824856-60834855 Solanum lycopersicum
Solyc10g079250.1 10.0kb downstream 10.0kb downstream 14969 true SL2.50ch10: 60809887-60824855 Solanum lycopersicum
Solyc10g079250.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch10: 60809887-60819886 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026428 5273 Angiosperm View MSA
121472046 5263 Asterids View MSA
123739358 5271 Pentapetalae View MSA
122787023 5272 Eudicot View MSA
121296323 5274 Embryophyte View MSA
123334505 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain