Gene : Solyc10g076870.1 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR24012:SF362 - RNA RECOGNITION MOTIF-CONTAINING PROTEIN Description:  Polyadenylate-binding protein, cytoplasmic and nuclear (AHRD V1 *--- PABP_COCIM); contains Interpro domain(s) IPR000504 RNA recognition motif, RNP-1
Genomic Order:  1756 Name:  ? Solyc10g076870.1
Secondary Identifier:  ? PAC:36155285
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc10g076870.1 0.5kb upstream 0.5kb upstream 10246 true SL2.50ch10: 59850330-59860575 Solanum lycopersicum
Solyc10g076870.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch10: 59860076-59860575 Solanum lycopersicum
Solyc10g076870.1 0.5kb downstream 0.5kb downstream 10246 true SL2.50ch10: 59849830-59860075 Solanum lycopersicum
Solyc10g076870.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch10: 59849830-59850329 Solanum lycopersicum
Solyc10g076870.1 1.0kb upstream 1.0kb upstream 10746 true SL2.50ch10: 59850330-59861075 Solanum lycopersicum
Solyc10g076870.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch10: 59860076-59861075 Solanum lycopersicum
Solyc10g076870.1 1.0kb downstream 1.0kb downstream 10746 true SL2.50ch10: 59849330-59860075 Solanum lycopersicum
Solyc10g076870.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch10: 59849330-59850329 Solanum lycopersicum
Solyc10g076870.1 2.0kb upstream 2.0kb upstream 11746 true SL2.50ch10: 59850330-59862075 Solanum lycopersicum
Solyc10g076870.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch10: 59860076-59862075 Solanum lycopersicum
Solyc10g076870.1 2.0kb downstream 2.0kb downstream 11746 true SL2.50ch10: 59848330-59860075 Solanum lycopersicum
Solyc10g076870.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch10: 59848330-59850329 Solanum lycopersicum
Solyc10g076870.1 5.0kb upstream 5.0kb upstream 14746 true SL2.50ch10: 59850330-59865075 Solanum lycopersicum
Solyc10g076870.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch10: 59860076-59865075 Solanum lycopersicum
Solyc10g076870.1 5.0kb downstream 5.0kb downstream 14746 true SL2.50ch10: 59845330-59860075 Solanum lycopersicum
Solyc10g076870.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch10: 59845330-59850329 Solanum lycopersicum
Solyc10g076870.1 10.0kb upstream 10.0kb upstream 19746 true SL2.50ch10: 59850330-59870075 Solanum lycopersicum
Solyc10g076870.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch10: 59860076-59870075 Solanum lycopersicum
Solyc10g076870.1 10.0kb downstream 10.0kb downstream 19746 true SL2.50ch10: 59840330-59860075 Solanum lycopersicum
Solyc10g076870.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch10: 59840330-59850329 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468945 5263 Asterids View MSA
123753271 5271 Pentapetalae View MSA
122775023 5272 Eudicot View MSA
122051526 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121312537 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain