Gene : Solyc10g078300.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR15672:SF15 - EXPRESSED PROTEIN Description:  Single-stranded nucleic acid binding R3H protein (Fragment) (AHRD V1 *-*- B3VWW5_POPTN); contains Interpro domain(s) IPR001374 Single-stranded nucleic acid binding R3H
Genomic Order:  1799 Name:  ? Solyc10g078300.1
Secondary Identifier:  ? PAC:36156429
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc10g078300.1 0.5kb upstream 0.5kb upstream 3950 true SL2.50ch10: 60132942-60136891 Solanum lycopersicum
Solyc10g078300.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch10: 60132942-60133441 Solanum lycopersicum
Solyc10g078300.1 0.5kb downstream 0.5kb downstream 3950 true SL2.50ch10: 60133442-60137391 Solanum lycopersicum
Solyc10g078300.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch10: 60136892-60137391 Solanum lycopersicum
Solyc10g078300.1 1.0kb upstream 1.0kb upstream 4450 true SL2.50ch10: 60132442-60136891 Solanum lycopersicum
Solyc10g078300.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch10: 60132442-60133441 Solanum lycopersicum
Solyc10g078300.1 1.0kb downstream 1.0kb downstream 4450 true SL2.50ch10: 60133442-60137891 Solanum lycopersicum
Solyc10g078300.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch10: 60136892-60137891 Solanum lycopersicum
Solyc10g078300.1 2.0kb upstream 2.0kb upstream 5450 true SL2.50ch10: 60131442-60136891 Solanum lycopersicum
Solyc10g078300.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch10: 60131442-60133441 Solanum lycopersicum
Solyc10g078300.1 2.0kb downstream 2.0kb downstream 5450 true SL2.50ch10: 60133442-60138891 Solanum lycopersicum
Solyc10g078300.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch10: 60136892-60138891 Solanum lycopersicum
Solyc10g078300.1 5.0kb upstream 5.0kb upstream 8450 true SL2.50ch10: 60128442-60136891 Solanum lycopersicum
Solyc10g078300.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch10: 60128442-60133441 Solanum lycopersicum
Solyc10g078300.1 5.0kb downstream 5.0kb downstream 8450 true SL2.50ch10: 60133442-60141891 Solanum lycopersicum
Solyc10g078300.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch10: 60136892-60141891 Solanum lycopersicum
Solyc10g078300.1 10.0kb upstream 10.0kb upstream 13450 true SL2.50ch10: 60123442-60136891 Solanum lycopersicum
Solyc10g078300.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch10: 60123442-60133441 Solanum lycopersicum
Solyc10g078300.1 10.0kb downstream 10.0kb downstream 13450 true SL2.50ch10: 60133442-60146891 Solanum lycopersicum
Solyc10g078300.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch10: 60136892-60146891 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121476488 5263 Asterids View MSA
123753124 5271 Pentapetalae View MSA
122794713 5272 Eudicot View MSA
122048574 5273 Angiosperm View MSA
123428874 5275 Viridiplantae View MSA
121347562 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain