Gene : Solyc10g078190.1 S. lycopersicum ITAG2.4
Defline:  (1 of 5) PTHR23068//PTHR23068:SF12 - DNA CYTOSINE-5- -METHYLTRANSFERASE 3-RELATED // SUBFAMILY NOT NAMED Description:  DNA (Cytosine-5-)-methyltransferase 3 (AHRD V1 *-*- A3QJV0_DANRE); contains Interpro domain(s) IPR015940 Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote
Genomic Order:  1789 Name:  ? Solyc10g078190.1
Secondary Identifier:  ? PAC:36155922
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc10g078190.1 0.5kb upstream 0.5kb upstream 5027 true SL2.50ch10: 60047509-60052535 Solanum lycopersicum
Solyc10g078190.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch10: 60052036-60052535 Solanum lycopersicum
Solyc10g078190.1 0.5kb downstream 0.5kb downstream 5027 true SL2.50ch10: 60047009-60052035 Solanum lycopersicum
Solyc10g078190.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch10: 60047009-60047508 Solanum lycopersicum
Solyc10g078190.1 1.0kb upstream 1.0kb upstream 5527 true SL2.50ch10: 60047509-60053035 Solanum lycopersicum
Solyc10g078190.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch10: 60052036-60053035 Solanum lycopersicum
Solyc10g078190.1 1.0kb downstream 1.0kb downstream 5527 true SL2.50ch10: 60046509-60052035 Solanum lycopersicum
Solyc10g078190.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch10: 60046509-60047508 Solanum lycopersicum
Solyc10g078190.1 2.0kb upstream 2.0kb upstream 6527 true SL2.50ch10: 60047509-60054035 Solanum lycopersicum
Solyc10g078190.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch10: 60052036-60054035 Solanum lycopersicum
Solyc10g078190.1 2.0kb downstream 2.0kb downstream 6527 true SL2.50ch10: 60045509-60052035 Solanum lycopersicum
Solyc10g078190.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch10: 60045509-60047508 Solanum lycopersicum
Solyc10g078190.1 5.0kb upstream 5.0kb upstream 9527 true SL2.50ch10: 60047509-60057035 Solanum lycopersicum
Solyc10g078190.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch10: 60052036-60057035 Solanum lycopersicum
Solyc10g078190.1 5.0kb downstream 5.0kb downstream 9527 true SL2.50ch10: 60042509-60052035 Solanum lycopersicum
Solyc10g078190.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch10: 60042509-60047508 Solanum lycopersicum
Solyc10g078190.1 10.0kb upstream 10.0kb upstream 14527 true SL2.50ch10: 60047509-60062035 Solanum lycopersicum
Solyc10g078190.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch10: 60052036-60062035 Solanum lycopersicum
Solyc10g078190.1 10.0kb downstream 10.0kb downstream 14527 true SL2.50ch10: 60037509-60052035 Solanum lycopersicum
Solyc10g078190.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch10: 60037509-60047508 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121386070 5263 Asterids View MSA
123745189 5271 Pentapetalae View MSA
122788994 5272 Eudicot View MSA
122049231 5273 Angiosperm View MSA
121350699 5274 Embryophyte View MSA
123381851 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain