Gene : Solyc04g073940.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR22904:SF358 - CC-TETRATRICOPEPTIDE REPEAT PROTEIN Description:  Tetratricopeptide repeat-containing protein (AHRD V1 **-- D7MT84_ARALY); contains Interpro domain(s) IPR015609 Molecular chaperone, heat shock protein, Hsp40, DnaJ
Genomic Order:  1940 Name:  ? Solyc04g073940.2
Secondary Identifier:  ? PAC:36142305
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc04g073940.2 0.5kb upstream 0.5kb upstream 2545 true SL2.50ch04: 59949691-59952235 Solanum lycopersicum
Solyc04g073940.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch04: 59951736-59952235 Solanum lycopersicum
Solyc04g073940.2 0.5kb downstream 0.5kb downstream 2545 true SL2.50ch04: 59949191-59951735 Solanum lycopersicum
Solyc04g073940.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch04: 59949191-59949690 Solanum lycopersicum
Solyc04g073940.2 1.0kb upstream 1.0kb upstream 3045 true SL2.50ch04: 59949691-59952735 Solanum lycopersicum
Solyc04g073940.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch04: 59951736-59952735 Solanum lycopersicum
Solyc04g073940.2 1.0kb downstream 1.0kb downstream 3045 true SL2.50ch04: 59948691-59951735 Solanum lycopersicum
Solyc04g073940.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch04: 59948691-59949690 Solanum lycopersicum
Solyc04g073940.2 2.0kb upstream 2.0kb upstream 4045 true SL2.50ch04: 59949691-59953735 Solanum lycopersicum
Solyc04g073940.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch04: 59951736-59953735 Solanum lycopersicum
Solyc04g073940.2 2.0kb downstream 2.0kb downstream 4045 true SL2.50ch04: 59947691-59951735 Solanum lycopersicum
Solyc04g073940.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch04: 59947691-59949690 Solanum lycopersicum
Solyc04g073940.2 5.0kb upstream 5.0kb upstream 7045 true SL2.50ch04: 59949691-59956735 Solanum lycopersicum
Solyc04g073940.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch04: 59951736-59956735 Solanum lycopersicum
Solyc04g073940.2 5.0kb downstream 5.0kb downstream 7045 true SL2.50ch04: 59944691-59951735 Solanum lycopersicum
Solyc04g073940.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch04: 59944691-59949690 Solanum lycopersicum
Solyc04g073940.2 10.0kb upstream 10.0kb upstream 12045 true SL2.50ch04: 59949691-59961735 Solanum lycopersicum
Solyc04g073940.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch04: 59951736-59961735 Solanum lycopersicum
Solyc04g073940.2 10.0kb downstream 10.0kb downstream 12045 true SL2.50ch04: 59939691-59951735 Solanum lycopersicum
Solyc04g073940.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch04: 59939691-59949690 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467207 5263 Asterids View MSA
123742749 5271 Pentapetalae View MSA
122798057 5272 Eudicot View MSA
122047040 5273 Angiosperm View MSA
121310683 5274 Embryophyte View MSA
123348108 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain