Gene : Solyc04g072560.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR12161:SF21 - REGULATOR OF VPS4 ACTIVITY IN THE MVB PATHWAY PROTEIN Description:  IST1 homolog (AHRD V1 *--- C1BSR8_9MAXI); contains Interpro domain(s) IPR005061 Protein of unknown function DUF292, eukaryotic
Genomic Order:  1901 Name:  ? Solyc04g072560.2
Secondary Identifier:  ? PAC:36142707
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc04g072560.2 0.5kb upstream 0.5kb upstream 5805 true SL2.50ch04: 59537577-59543381 Solanum lycopersicum
Solyc04g072560.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch04: 59537577-59538076 Solanum lycopersicum
Solyc04g072560.2 0.5kb downstream 0.5kb downstream 5805 true SL2.50ch04: 59538077-59543881 Solanum lycopersicum
Solyc04g072560.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch04: 59543382-59543881 Solanum lycopersicum
Solyc04g072560.2 1.0kb upstream 1.0kb upstream 6305 true SL2.50ch04: 59537077-59543381 Solanum lycopersicum
Solyc04g072560.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch04: 59537077-59538076 Solanum lycopersicum
Solyc04g072560.2 1.0kb downstream 1.0kb downstream 6305 true SL2.50ch04: 59538077-59544381 Solanum lycopersicum
Solyc04g072560.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch04: 59543382-59544381 Solanum lycopersicum
Solyc04g072560.2 2.0kb upstream 2.0kb upstream 7305 true SL2.50ch04: 59536077-59543381 Solanum lycopersicum
Solyc04g072560.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch04: 59536077-59538076 Solanum lycopersicum
Solyc04g072560.2 2.0kb downstream 2.0kb downstream 7305 true SL2.50ch04: 59538077-59545381 Solanum lycopersicum
Solyc04g072560.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch04: 59543382-59545381 Solanum lycopersicum
Solyc04g072560.2 5.0kb upstream 5.0kb upstream 10305 true SL2.50ch04: 59533077-59543381 Solanum lycopersicum
Solyc04g072560.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch04: 59533077-59538076 Solanum lycopersicum
Solyc04g072560.2 5.0kb downstream 5.0kb downstream 10305 true SL2.50ch04: 59538077-59548381 Solanum lycopersicum
Solyc04g072560.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch04: 59543382-59548381 Solanum lycopersicum
Solyc04g072560.2 10.0kb upstream 10.0kb upstream 15305 true SL2.50ch04: 59528077-59543381 Solanum lycopersicum
Solyc04g072560.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch04: 59528077-59538076 Solanum lycopersicum
Solyc04g072560.2 10.0kb downstream 10.0kb downstream 15305 true SL2.50ch04: 59538077-59553381 Solanum lycopersicum
Solyc04g072560.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch04: 59543382-59553381 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467156 5263 Asterids View MSA
123736868 5271 Pentapetalae View MSA
122789571 5272 Eudicot View MSA
122045314 5273 Angiosperm View MSA
121350449 5274 Embryophyte View MSA
123424640 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain