Gene : Solyc04g076560.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K14765 - U3 small nucleolar ribonucleoprotein protein LCP5 (NGDN, LCP5) Description:  Neuroguidin (Fragment) (AHRD V1 *--- C0PUK7_SALSA); contains Interpro domain(s) IPR007146 Sas10/Utp3/C1D
Genomic Order:  2103 Name:  ? Solyc04g076560.2
Secondary Identifier:  ? PAC:36142276
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc04g076560.2 0.5kb upstream 0.5kb upstream 4369 true SL2.50ch04: 61468369-61472737 Solanum lycopersicum
Solyc04g076560.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch04: 61468369-61468868 Solanum lycopersicum
Solyc04g076560.2 0.5kb downstream 0.5kb downstream 4369 true SL2.50ch04: 61468869-61473237 Solanum lycopersicum
Solyc04g076560.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch04: 61472738-61473237 Solanum lycopersicum
Solyc04g076560.2 1.0kb upstream 1.0kb upstream 4869 true SL2.50ch04: 61467869-61472737 Solanum lycopersicum
Solyc04g076560.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch04: 61467869-61468868 Solanum lycopersicum
Solyc04g076560.2 1.0kb downstream 1.0kb downstream 4869 true SL2.50ch04: 61468869-61473737 Solanum lycopersicum
Solyc04g076560.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch04: 61472738-61473737 Solanum lycopersicum
Solyc04g076560.2 2.0kb upstream 2.0kb upstream 5869 true SL2.50ch04: 61466869-61472737 Solanum lycopersicum
Solyc04g076560.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch04: 61466869-61468868 Solanum lycopersicum
Solyc04g076560.2 2.0kb downstream 2.0kb downstream 5869 true SL2.50ch04: 61468869-61474737 Solanum lycopersicum
Solyc04g076560.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch04: 61472738-61474737 Solanum lycopersicum
Solyc04g076560.2 5.0kb upstream 5.0kb upstream 8869 true SL2.50ch04: 61463869-61472737 Solanum lycopersicum
Solyc04g076560.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch04: 61463869-61468868 Solanum lycopersicum
Solyc04g076560.2 5.0kb downstream 5.0kb downstream 8869 true SL2.50ch04: 61468869-61477737 Solanum lycopersicum
Solyc04g076560.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch04: 61472738-61477737 Solanum lycopersicum
Solyc04g076560.2 10.0kb upstream 10.0kb upstream 13869 true SL2.50ch04: 61458869-61472737 Solanum lycopersicum
Solyc04g076560.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch04: 61458869-61468868 Solanum lycopersicum
Solyc04g076560.2 10.0kb downstream 10.0kb downstream 13869 true SL2.50ch04: 61468869-61482737 Solanum lycopersicum
Solyc04g076560.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch04: 61472738-61482737 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473654 5263 Asterids View MSA
123740201 5271 Pentapetalae View MSA
122793793 5272 Eudicot View MSA
122047581 5273 Angiosperm View MSA
121345702 5274 Embryophyte View MSA
123380258 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain