Gene : Solyc04g053140.1 S. lycopersicum ITAG2.4
Defline:  (1 of 14) PF04759 - Protein of unknown function, DUF617 (DUF617) Description:  Plant-specific domain TIGR01570 family protein (AHRD V1 ***- B6TX93_MAIZE); contains Interpro domain(s) IPR006460 Protein of unknown function DUF617, plant
Genomic Order:  1473 Name:  ? Solyc04g053140.1
Secondary Identifier:  ? PAC:36143947
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc04g053140.1 0.5kb upstream 0.5kb upstream 1211 true SL2.50ch04: 51754428-51755638 Solanum lycopersicum
Solyc04g053140.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch04: 51755139-51755638 Solanum lycopersicum
Solyc04g053140.1 0.5kb downstream 0.5kb downstream 1211 true SL2.50ch04: 51753928-51755138 Solanum lycopersicum
Solyc04g053140.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch04: 51753928-51754427 Solanum lycopersicum
Solyc04g053140.1 1.0kb upstream 1.0kb upstream 1711 true SL2.50ch04: 51754428-51756138 Solanum lycopersicum
Solyc04g053140.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch04: 51755139-51756138 Solanum lycopersicum
Solyc04g053140.1 1.0kb downstream 1.0kb downstream 1711 true SL2.50ch04: 51753428-51755138 Solanum lycopersicum
Solyc04g053140.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch04: 51753428-51754427 Solanum lycopersicum
Solyc04g053140.1 2.0kb upstream 2.0kb upstream 2711 true SL2.50ch04: 51754428-51757138 Solanum lycopersicum
Solyc04g053140.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch04: 51755139-51757138 Solanum lycopersicum
Solyc04g053140.1 2.0kb downstream 2.0kb downstream 2711 true SL2.50ch04: 51752428-51755138 Solanum lycopersicum
Solyc04g053140.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch04: 51752428-51754427 Solanum lycopersicum
Solyc04g053140.1 5.0kb upstream 5.0kb upstream 5711 true SL2.50ch04: 51754428-51760138 Solanum lycopersicum
Solyc04g053140.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch04: 51755139-51760138 Solanum lycopersicum
Solyc04g053140.1 5.0kb downstream 5.0kb downstream 5711 true SL2.50ch04: 51749428-51755138 Solanum lycopersicum
Solyc04g053140.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch04: 51749428-51754427 Solanum lycopersicum
Solyc04g053140.1 10.0kb upstream 10.0kb upstream 10711 true SL2.50ch04: 51754428-51765138 Solanum lycopersicum
Solyc04g053140.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch04: 51755139-51765138 Solanum lycopersicum
Solyc04g053140.1 10.0kb downstream 10.0kb downstream 10711 true SL2.50ch04: 51744428-51755138 Solanum lycopersicum
Solyc04g053140.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch04: 51744428-51754427 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121414253 5263 Asterids View MSA
123746420 5271 Pentapetalae View MSA
122793418 5272 Eudicot View MSA
122044454 5273 Angiosperm View MSA
121349765 5274 Embryophyte View MSA
123381434 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain