Gene : Solyc04g053080.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K18342 - OTU domain-containing protein 6 [EC:3.4.19.12] (OTUD6) Description:  OTU domain-containing protein 6B (AHRD V1 ***- B6TYC6_MAIZE); contains Interpro domain(s) IPR003323 Ovarian tumour, otubain
Genomic Order:  1467 Name:  ? Solyc04g053080.2
Secondary Identifier:  ? PAC:36143092
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc04g053080.2 0.5kb upstream 0.5kb upstream 2309 true SL2.50ch04: 51434732-51437040 Solanum lycopersicum
Solyc04g053080.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch04: 51436541-51437040 Solanum lycopersicum
Solyc04g053080.2 0.5kb downstream 0.5kb downstream 2309 true SL2.50ch04: 51434232-51436540 Solanum lycopersicum
Solyc04g053080.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch04: 51434232-51434731 Solanum lycopersicum
Solyc04g053080.2 1.0kb upstream 1.0kb upstream 2809 true SL2.50ch04: 51434732-51437540 Solanum lycopersicum
Solyc04g053080.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch04: 51436541-51437540 Solanum lycopersicum
Solyc04g053080.2 1.0kb downstream 1.0kb downstream 2809 true SL2.50ch04: 51433732-51436540 Solanum lycopersicum
Solyc04g053080.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch04: 51433732-51434731 Solanum lycopersicum
Solyc04g053080.2 2.0kb upstream 2.0kb upstream 3809 true SL2.50ch04: 51434732-51438540 Solanum lycopersicum
Solyc04g053080.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch04: 51436541-51438540 Solanum lycopersicum
Solyc04g053080.2 2.0kb downstream 2.0kb downstream 3809 true SL2.50ch04: 51432732-51436540 Solanum lycopersicum
Solyc04g053080.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch04: 51432732-51434731 Solanum lycopersicum
Solyc04g053080.2 5.0kb upstream 5.0kb upstream 6809 true SL2.50ch04: 51434732-51441540 Solanum lycopersicum
Solyc04g053080.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch04: 51436541-51441540 Solanum lycopersicum
Solyc04g053080.2 5.0kb downstream 5.0kb downstream 6809 true SL2.50ch04: 51429732-51436540 Solanum lycopersicum
Solyc04g053080.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch04: 51429732-51434731 Solanum lycopersicum
Solyc04g053080.2 10.0kb upstream 10.0kb upstream 11809 true SL2.50ch04: 51434732-51446540 Solanum lycopersicum
Solyc04g053080.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch04: 51436541-51446540 Solanum lycopersicum
Solyc04g053080.2 10.0kb downstream 10.0kb downstream 11809 true SL2.50ch04: 51424732-51436540 Solanum lycopersicum
Solyc04g053080.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch04: 51424732-51434731 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473010 5263 Asterids View MSA
123738342 5271 Pentapetalae View MSA
122787520 5272 Eudicot View MSA
122043014 5273 Angiosperm View MSA
121346407 5274 Embryophyte View MSA
123428461 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain