Gene : Solyc04g054930.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR10788:SF19 - TREHALOSE-PHOSPHATE PHOSPHATASE E-RELATED Description:  Trehalose-6-phosphate phosphatase-like protein (AHRD V1 ***- Q9LX18_ARATH); contains Interpro domain(s) IPR003337 Trehalose-phosphatase
Genomic Order:  1543 Name:  ? Solyc04g054930.2
Secondary Identifier:  ? PAC:36143383
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc04g054930.2 0.5kb upstream 0.5kb upstream 3336 true SL2.50ch04: 53438494-53441829 Solanum lycopersicum
Solyc04g054930.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch04: 53441330-53441829 Solanum lycopersicum
Solyc04g054930.2 0.5kb downstream 0.5kb downstream 3336 true SL2.50ch04: 53437994-53441329 Solanum lycopersicum
Solyc04g054930.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch04: 53437994-53438493 Solanum lycopersicum
Solyc04g054930.2 1.0kb upstream 1.0kb upstream 3836 true SL2.50ch04: 53438494-53442329 Solanum lycopersicum
Solyc04g054930.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch04: 53441330-53442329 Solanum lycopersicum
Solyc04g054930.2 1.0kb downstream 1.0kb downstream 3836 true SL2.50ch04: 53437494-53441329 Solanum lycopersicum
Solyc04g054930.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch04: 53437494-53438493 Solanum lycopersicum
Solyc04g054930.2 2.0kb upstream 2.0kb upstream 4836 true SL2.50ch04: 53438494-53443329 Solanum lycopersicum
Solyc04g054930.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch04: 53441330-53443329 Solanum lycopersicum
Solyc04g054930.2 2.0kb downstream 2.0kb downstream 4836 true SL2.50ch04: 53436494-53441329 Solanum lycopersicum
Solyc04g054930.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch04: 53436494-53438493 Solanum lycopersicum
Solyc04g054930.2 5.0kb upstream 5.0kb upstream 7836 true SL2.50ch04: 53438494-53446329 Solanum lycopersicum
Solyc04g054930.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch04: 53441330-53446329 Solanum lycopersicum
Solyc04g054930.2 5.0kb downstream 5.0kb downstream 7836 true SL2.50ch04: 53433494-53441329 Solanum lycopersicum
Solyc04g054930.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch04: 53433494-53438493 Solanum lycopersicum
Solyc04g054930.2 10.0kb upstream 10.0kb upstream 12836 true SL2.50ch04: 53438494-53451329 Solanum lycopersicum
Solyc04g054930.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch04: 53441330-53451329 Solanum lycopersicum
Solyc04g054930.2 10.0kb downstream 10.0kb downstream 12836 true SL2.50ch04: 53428494-53441329 Solanum lycopersicum
Solyc04g054930.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch04: 53428494-53438493 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470250 5263 Asterids View MSA
123746966 5271 Pentapetalae View MSA
122786046 5272 Eudicot View MSA
122042129 5273 Angiosperm View MSA
121351669 5274 Embryophyte View MSA
123427869 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain