Gene : Solyc04g054690.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) 1.10.3.2//1.10.3.3 - Laccase / Urishiol oxidase // L-ascorbate oxidase / Ascorbase Description:  Laccase 1a (AHRD V1 ***- B9IG56_POPTR); contains Interpro domain(s) IPR017760 L-ascorbate oxidase, plants
Genomic Order:  1519 Name:  ? Solyc04g054690.2
Secondary Identifier:  ? PAC:36142476
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-5466 Solanum lycopersicum pathologic  
Slycopersicum PWY-6824 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc04g054690.2 0.5kb upstream 0.5kb upstream 2945 true SL2.50ch04: 53051129-53054073 Solanum lycopersicum
Solyc04g054690.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch04: 53053574-53054073 Solanum lycopersicum
Solyc04g054690.2 0.5kb downstream 0.5kb downstream 2945 true SL2.50ch04: 53050629-53053573 Solanum lycopersicum
Solyc04g054690.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch04: 53050629-53051128 Solanum lycopersicum
Solyc04g054690.2 1.0kb upstream 1.0kb upstream 3445 true SL2.50ch04: 53051129-53054573 Solanum lycopersicum
Solyc04g054690.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch04: 53053574-53054573 Solanum lycopersicum
Solyc04g054690.2 1.0kb downstream 1.0kb downstream 3445 true SL2.50ch04: 53050129-53053573 Solanum lycopersicum
Solyc04g054690.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch04: 53050129-53051128 Solanum lycopersicum
Solyc04g054690.2 2.0kb upstream 2.0kb upstream 4445 true SL2.50ch04: 53051129-53055573 Solanum lycopersicum
Solyc04g054690.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch04: 53053574-53055573 Solanum lycopersicum
Solyc04g054690.2 2.0kb downstream 2.0kb downstream 4445 true SL2.50ch04: 53049129-53053573 Solanum lycopersicum
Solyc04g054690.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch04: 53049129-53051128 Solanum lycopersicum
Solyc04g054690.2 5.0kb upstream 5.0kb upstream 7445 true SL2.50ch04: 53051129-53058573 Solanum lycopersicum
Solyc04g054690.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch04: 53053574-53058573 Solanum lycopersicum
Solyc04g054690.2 5.0kb downstream 5.0kb downstream 7445 true SL2.50ch04: 53046129-53053573 Solanum lycopersicum
Solyc04g054690.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch04: 53046129-53051128 Solanum lycopersicum
Solyc04g054690.2 10.0kb upstream 10.0kb upstream 12445 true SL2.50ch04: 53051129-53063573 Solanum lycopersicum
Solyc04g054690.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch04: 53053574-53063573 Solanum lycopersicum
Solyc04g054690.2 10.0kb downstream 10.0kb downstream 12445 true SL2.50ch04: 53041129-53053573 Solanum lycopersicum
Solyc04g054690.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch04: 53041129-53051128 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121476034 5263 Asterids View MSA
123745907 5271 Pentapetalae View MSA
122793198 5272 Eudicot View MSA
122046121 5273 Angiosperm View MSA
121348734 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain