Gene : Solyc04g070980.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) K01853 - cycloartenol synthase (E5.4.99.8) Description:  Lanosterol synthase (AHRD V1 **** Q1ERD3_LOTJA); contains Interpro domain(s) IPR018333 Squalene cyclase
Genomic Order:  1746 Name:  ? Solyc04g070980.2
Secondary Identifier:  ? PAC:36143059
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-2541 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc04g070980.2 0.5kb upstream 0.5kb upstream 16456 true SL2.50ch04: 57823989-57840444 Solanum lycopersicum
Solyc04g070980.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch04: 57823989-57824488 Solanum lycopersicum
Solyc04g070980.2 0.5kb downstream 0.5kb downstream 16456 true SL2.50ch04: 57824489-57840944 Solanum lycopersicum
Solyc04g070980.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch04: 57840445-57840944 Solanum lycopersicum
Solyc04g070980.2 1.0kb upstream 1.0kb upstream 16956 true SL2.50ch04: 57823489-57840444 Solanum lycopersicum
Solyc04g070980.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch04: 57823489-57824488 Solanum lycopersicum
Solyc04g070980.2 1.0kb downstream 1.0kb downstream 16956 true SL2.50ch04: 57824489-57841444 Solanum lycopersicum
Solyc04g070980.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch04: 57840445-57841444 Solanum lycopersicum
Solyc04g070980.2 2.0kb upstream 2.0kb upstream 17956 true SL2.50ch04: 57822489-57840444 Solanum lycopersicum
Solyc04g070980.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch04: 57822489-57824488 Solanum lycopersicum
Solyc04g070980.2 2.0kb downstream 2.0kb downstream 17956 true SL2.50ch04: 57824489-57842444 Solanum lycopersicum
Solyc04g070980.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch04: 57840445-57842444 Solanum lycopersicum
Solyc04g070980.2 5.0kb upstream 5.0kb upstream 20956 true SL2.50ch04: 57819489-57840444 Solanum lycopersicum
Solyc04g070980.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch04: 57819489-57824488 Solanum lycopersicum
Solyc04g070980.2 5.0kb downstream 5.0kb downstream 20956 true SL2.50ch04: 57824489-57845444 Solanum lycopersicum
Solyc04g070980.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch04: 57840445-57845444 Solanum lycopersicum
Solyc04g070980.2 10.0kb upstream 10.0kb upstream 25956 true SL2.50ch04: 57814489-57840444 Solanum lycopersicum
Solyc04g070980.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch04: 57814489-57824488 Solanum lycopersicum
Solyc04g070980.2 10.0kb downstream 10.0kb downstream 25956 true SL2.50ch04: 57824489-57850444 Solanum lycopersicum
Solyc04g070980.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch04: 57840445-57850444 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469623 5263 Asterids View MSA
123750129 5271 Pentapetalae View MSA
122795524 5272 Eudicot View MSA
122043543 5273 Angiosperm View MSA
121345283 5274 Embryophyte View MSA
123424991 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain