Gene : Solyc04g071470.2 S. lycopersicum ITAG2.4

Description:  Chromosome 15 contig 1 DNA sequence (AHRD V1 ***- Q00V16_OSTTA); contains Interpro domain(s) IPR011046 WD40 repeat-like Genomic Order:  1795
Name:  ? Solyc04g071470.2 Secondary Identifier:  ? PAC:36141990

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc04g071470.2 0.5kb upstream 0.5kb upstream 8661 true SL2.50ch04: 58448266-58456926 Solanum lycopersicum
Solyc04g071470.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch04: 58448266-58448765 Solanum lycopersicum
Solyc04g071470.2 0.5kb downstream 0.5kb downstream 8661 true SL2.50ch04: 58448766-58457426 Solanum lycopersicum
Solyc04g071470.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch04: 58456927-58457426 Solanum lycopersicum
Solyc04g071470.2 1.0kb upstream 1.0kb upstream 9161 true SL2.50ch04: 58447766-58456926 Solanum lycopersicum
Solyc04g071470.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch04: 58447766-58448765 Solanum lycopersicum
Solyc04g071470.2 1.0kb downstream 1.0kb downstream 9161 true SL2.50ch04: 58448766-58457926 Solanum lycopersicum
Solyc04g071470.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch04: 58456927-58457926 Solanum lycopersicum
Solyc04g071470.2 2.0kb upstream 2.0kb upstream 10161 true SL2.50ch04: 58446766-58456926 Solanum lycopersicum
Solyc04g071470.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch04: 58446766-58448765 Solanum lycopersicum
Solyc04g071470.2 2.0kb downstream 2.0kb downstream 10161 true SL2.50ch04: 58448766-58458926 Solanum lycopersicum
Solyc04g071470.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch04: 58456927-58458926 Solanum lycopersicum
Solyc04g071470.2 5.0kb upstream 5.0kb upstream 13161 true SL2.50ch04: 58443766-58456926 Solanum lycopersicum
Solyc04g071470.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch04: 58443766-58448765 Solanum lycopersicum
Solyc04g071470.2 5.0kb downstream 5.0kb downstream 13161 true SL2.50ch04: 58448766-58461926 Solanum lycopersicum
Solyc04g071470.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch04: 58456927-58461926 Solanum lycopersicum
Solyc04g071470.2 10.0kb upstream 10.0kb upstream 18161 true SL2.50ch04: 58438766-58456926 Solanum lycopersicum
Solyc04g071470.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch04: 58438766-58448765 Solanum lycopersicum
Solyc04g071470.2 10.0kb downstream 10.0kb downstream 18161 true SL2.50ch04: 58448766-58466926 Solanum lycopersicum
Solyc04g071470.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch04: 58456927-58466926 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478271 5263 Asterids View MSA
123742788 5271 Pentapetalae View MSA
122795431 5272 Eudicot View MSA
122048198 5273 Angiosperm View MSA
121348221 5274 Embryophyte View MSA
123425836 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain