Gene : Solyc04g058090.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) 6.3.3.1 - Phosphoribosylformylglycinamidine cyclo-ligase / Phosphoribosylaminoimidazole synthetase Description:  Phosphoribosylformylglycinamidine cyclo-ligase (AHRD V1 **** Q6T7F2_SOLTU); contains Interpro domain(s) IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase
Genomic Order:  1656 Name:  ? Solyc04g058090.2
Secondary Identifier:  ? PAC:36142015
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-6121 Solanum lycopersicum pathologic  
Slycopersicum PWY-841 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc04g058090.2 0.5kb upstream 0.5kb upstream 6124 true SL2.50ch04: 55200575-55206698 Solanum lycopersicum
Solyc04g058090.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch04: 55206199-55206698 Solanum lycopersicum
Solyc04g058090.2 0.5kb downstream 0.5kb downstream 6124 true SL2.50ch04: 55200075-55206198 Solanum lycopersicum
Solyc04g058090.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch04: 55200075-55200574 Solanum lycopersicum
Solyc04g058090.2 1.0kb upstream 1.0kb upstream 6624 true SL2.50ch04: 55200575-55207198 Solanum lycopersicum
Solyc04g058090.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch04: 55206199-55207198 Solanum lycopersicum
Solyc04g058090.2 1.0kb downstream 1.0kb downstream 6624 true SL2.50ch04: 55199575-55206198 Solanum lycopersicum
Solyc04g058090.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch04: 55199575-55200574 Solanum lycopersicum
Solyc04g058090.2 2.0kb upstream 2.0kb upstream 7624 true SL2.50ch04: 55200575-55208198 Solanum lycopersicum
Solyc04g058090.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch04: 55206199-55208198 Solanum lycopersicum
Solyc04g058090.2 2.0kb downstream 2.0kb downstream 7624 true SL2.50ch04: 55198575-55206198 Solanum lycopersicum
Solyc04g058090.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch04: 55198575-55200574 Solanum lycopersicum
Solyc04g058090.2 5.0kb upstream 5.0kb upstream 10624 true SL2.50ch04: 55200575-55211198 Solanum lycopersicum
Solyc04g058090.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch04: 55206199-55211198 Solanum lycopersicum
Solyc04g058090.2 5.0kb downstream 5.0kb downstream 10624 true SL2.50ch04: 55195575-55206198 Solanum lycopersicum
Solyc04g058090.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch04: 55195575-55200574 Solanum lycopersicum
Solyc04g058090.2 10.0kb upstream 10.0kb upstream 15624 true SL2.50ch04: 55200575-55216198 Solanum lycopersicum
Solyc04g058090.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch04: 55206199-55216198 Solanum lycopersicum
Solyc04g058090.2 10.0kb downstream 10.0kb downstream 15624 true SL2.50ch04: 55190575-55206198 Solanum lycopersicum
Solyc04g058090.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch04: 55190575-55200574 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468473 5263 Asterids View MSA
123745564 5271 Pentapetalae View MSA
122789177 5272 Eudicot View MSA
122043371 5273 Angiosperm View MSA
121346228 5274 Embryophyte View MSA
123428592 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain