Gene : Solyc04g064820.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K12479 - vacuolar protein sorting-associated protein 45 (VPS45) Description:  Vacuolar protein-sorting protein 45 (AHRD V1 ***- B6UDC0_MAIZE); contains Interpro domain(s) IPR001619 Sec1-like protein
Genomic Order:  1729 Name:  ? Solyc04g064820.2
Secondary Identifier:  ? PAC:36141474
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc04g064820.2 0.5kb upstream 0.5kb upstream 16098 true SL2.50ch04: 55984876-56000973 Solanum lycopersicum
Solyc04g064820.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch04: 55984876-55985375 Solanum lycopersicum
Solyc04g064820.2 0.5kb downstream 0.5kb downstream 16098 true SL2.50ch04: 55985376-56001473 Solanum lycopersicum
Solyc04g064820.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch04: 56000974-56001473 Solanum lycopersicum
Solyc04g064820.2 1.0kb upstream 1.0kb upstream 16598 true SL2.50ch04: 55984376-56000973 Solanum lycopersicum
Solyc04g064820.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch04: 55984376-55985375 Solanum lycopersicum
Solyc04g064820.2 1.0kb downstream 1.0kb downstream 16598 true SL2.50ch04: 55985376-56001973 Solanum lycopersicum
Solyc04g064820.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch04: 56000974-56001973 Solanum lycopersicum
Solyc04g064820.2 2.0kb upstream 2.0kb upstream 17598 true SL2.50ch04: 55983376-56000973 Solanum lycopersicum
Solyc04g064820.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch04: 55983376-55985375 Solanum lycopersicum
Solyc04g064820.2 2.0kb downstream 2.0kb downstream 17598 true SL2.50ch04: 55985376-56002973 Solanum lycopersicum
Solyc04g064820.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch04: 56000974-56002973 Solanum lycopersicum
Solyc04g064820.2 5.0kb upstream 5.0kb upstream 20598 true SL2.50ch04: 55980376-56000973 Solanum lycopersicum
Solyc04g064820.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch04: 55980376-55985375 Solanum lycopersicum
Solyc04g064820.2 5.0kb downstream 5.0kb downstream 20598 true SL2.50ch04: 55985376-56005973 Solanum lycopersicum
Solyc04g064820.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch04: 56000974-56005973 Solanum lycopersicum
Solyc04g064820.2 10.0kb upstream 10.0kb upstream 25598 true SL2.50ch04: 55975376-56000973 Solanum lycopersicum
Solyc04g064820.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch04: 55975376-55985375 Solanum lycopersicum
Solyc04g064820.2 10.0kb downstream 10.0kb downstream 25598 true SL2.50ch04: 55985376-56010973 Solanum lycopersicum
Solyc04g064820.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch04: 56000974-56010973 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467443 5263 Asterids View MSA
123737015 5271 Pentapetalae View MSA
122795036 5272 Eudicot View MSA
122044775 5273 Angiosperm View MSA
121347331 5274 Embryophyte View MSA
123424934 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain