Gene : Solyc04g049180.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR13377 - PLACENTAL PROTEIN 6 Description:  Transmembrane protein 115 (AHRD V1 ***- B6TIG9_MAIZE); contains Interpro domain(s) IPR013861 Protein of unknown function DUF1751, integral membrane, eukaryotic
Genomic Order:  1195 Name:  ? Solyc04g049180.2
Secondary Identifier:  ? PAC:36142827
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc04g049180.2 0.5kb upstream 0.5kb upstream 3345 true SL2.50ch04: 40028905-40032249 Solanum lycopersicum
Solyc04g049180.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch04: 40028905-40029404 Solanum lycopersicum
Solyc04g049180.2 0.5kb downstream 0.5kb downstream 3345 true SL2.50ch04: 40029405-40032749 Solanum lycopersicum
Solyc04g049180.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch04: 40032250-40032749 Solanum lycopersicum
Solyc04g049180.2 1.0kb upstream 1.0kb upstream 3845 true SL2.50ch04: 40028405-40032249 Solanum lycopersicum
Solyc04g049180.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch04: 40028405-40029404 Solanum lycopersicum
Solyc04g049180.2 1.0kb downstream 1.0kb downstream 3845 true SL2.50ch04: 40029405-40033249 Solanum lycopersicum
Solyc04g049180.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch04: 40032250-40033249 Solanum lycopersicum
Solyc04g049180.2 2.0kb upstream 2.0kb upstream 4845 true SL2.50ch04: 40027405-40032249 Solanum lycopersicum
Solyc04g049180.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch04: 40027405-40029404 Solanum lycopersicum
Solyc04g049180.2 2.0kb downstream 2.0kb downstream 4845 true SL2.50ch04: 40029405-40034249 Solanum lycopersicum
Solyc04g049180.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch04: 40032250-40034249 Solanum lycopersicum
Solyc04g049180.2 5.0kb upstream 5.0kb upstream 7845 true SL2.50ch04: 40024405-40032249 Solanum lycopersicum
Solyc04g049180.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch04: 40024405-40029404 Solanum lycopersicum
Solyc04g049180.2 5.0kb downstream 5.0kb downstream 7845 true SL2.50ch04: 40029405-40037249 Solanum lycopersicum
Solyc04g049180.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch04: 40032250-40037249 Solanum lycopersicum
Solyc04g049180.2 10.0kb upstream 10.0kb upstream 12845 true SL2.50ch04: 40019405-40032249 Solanum lycopersicum
Solyc04g049180.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch04: 40019405-40029404 Solanum lycopersicum
Solyc04g049180.2 10.0kb downstream 10.0kb downstream 12845 true SL2.50ch04: 40029405-40042249 Solanum lycopersicum
Solyc04g049180.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch04: 40032250-40042249 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474556 5263 Asterids View MSA
123748664 5271 Pentapetalae View MSA
122792028 5272 Eudicot View MSA
122043069 5273 Angiosperm View MSA
121350097 5274 Embryophyte View MSA
123424498 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain