Gene : Solyc04g049490.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR12820 - VACUOLAR SORTING PROTEIN 53 Description:  Vacuolar protein sorting-associated protein 53 (AHRD V1 **-- D0NTZ4_PHYIN); contains Interpro domain(s) IPR007234 Vps53-like, N-terminal
Genomic Order:  1226 Name:  ? Solyc04g049490.2
Secondary Identifier:  ? PAC:36141928
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc04g049490.2 0.5kb upstream 0.5kb upstream 20420 true SL2.50ch04: 42087003-42107422 Solanum lycopersicum
Solyc04g049490.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch04: 42087003-42087502 Solanum lycopersicum
Solyc04g049490.2 0.5kb downstream 0.5kb downstream 20420 true SL2.50ch04: 42087503-42107922 Solanum lycopersicum
Solyc04g049490.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch04: 42107423-42107922 Solanum lycopersicum
Solyc04g049490.2 1.0kb upstream 1.0kb upstream 20920 true SL2.50ch04: 42086503-42107422 Solanum lycopersicum
Solyc04g049490.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch04: 42086503-42087502 Solanum lycopersicum
Solyc04g049490.2 1.0kb downstream 1.0kb downstream 20920 true SL2.50ch04: 42087503-42108422 Solanum lycopersicum
Solyc04g049490.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch04: 42107423-42108422 Solanum lycopersicum
Solyc04g049490.2 2.0kb upstream 2.0kb upstream 21920 true SL2.50ch04: 42085503-42107422 Solanum lycopersicum
Solyc04g049490.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch04: 42085503-42087502 Solanum lycopersicum
Solyc04g049490.2 2.0kb downstream 2.0kb downstream 21920 true SL2.50ch04: 42087503-42109422 Solanum lycopersicum
Solyc04g049490.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch04: 42107423-42109422 Solanum lycopersicum
Solyc04g049490.2 5.0kb upstream 5.0kb upstream 24920 true SL2.50ch04: 42082503-42107422 Solanum lycopersicum
Solyc04g049490.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch04: 42082503-42087502 Solanum lycopersicum
Solyc04g049490.2 5.0kb downstream 5.0kb downstream 24920 true SL2.50ch04: 42087503-42112422 Solanum lycopersicum
Solyc04g049490.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch04: 42107423-42112422 Solanum lycopersicum
Solyc04g049490.2 10.0kb upstream 10.0kb upstream 29920 true SL2.50ch04: 42077503-42107422 Solanum lycopersicum
Solyc04g049490.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch04: 42077503-42087502 Solanum lycopersicum
Solyc04g049490.2 10.0kb downstream 10.0kb downstream 29920 true SL2.50ch04: 42087503-42117422 Solanum lycopersicum
Solyc04g049490.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch04: 42107423-42117422 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478620 5263 Asterids View MSA
123745504 5271 Pentapetalae View MSA
122792209 5272 Eudicot View MSA
122042616 5273 Angiosperm View MSA
121345322 5274 Embryophyte View MSA
123426739 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain