Gene : Solyc04g040170.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR10535:SF2 - DNA-DIRECTED RNA POLYMERASE V SUBUNIT 5A-RELATED Description:  DNA-directed RNA polymerases I (AHRD V1 ***- C1FYH2_PARBD); contains Interpro domain(s) IPR014381 DNA-directed RNA polymerase, RPB5 subunit
Genomic Order:  837 Name:  ? Solyc04g040170.2
Secondary Identifier:  ? PAC:36141918
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc04g040170.2 0.5kb upstream 0.5kb upstream 9399 true SL2.50ch04: 11959693-11969091 Solanum lycopersicum
Solyc04g040170.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch04: 11968592-11969091 Solanum lycopersicum
Solyc04g040170.2 0.5kb downstream 0.5kb downstream 9399 true SL2.50ch04: 11959193-11968591 Solanum lycopersicum
Solyc04g040170.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch04: 11959193-11959692 Solanum lycopersicum
Solyc04g040170.2 1.0kb upstream 1.0kb upstream 9899 true SL2.50ch04: 11959693-11969591 Solanum lycopersicum
Solyc04g040170.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch04: 11968592-11969591 Solanum lycopersicum
Solyc04g040170.2 1.0kb downstream 1.0kb downstream 9899 true SL2.50ch04: 11958693-11968591 Solanum lycopersicum
Solyc04g040170.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch04: 11958693-11959692 Solanum lycopersicum
Solyc04g040170.2 2.0kb upstream 2.0kb upstream 10899 true SL2.50ch04: 11959693-11970591 Solanum lycopersicum
Solyc04g040170.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch04: 11968592-11970591 Solanum lycopersicum
Solyc04g040170.2 2.0kb downstream 2.0kb downstream 10899 true SL2.50ch04: 11957693-11968591 Solanum lycopersicum
Solyc04g040170.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch04: 11957693-11959692 Solanum lycopersicum
Solyc04g040170.2 5.0kb upstream 5.0kb upstream 13899 true SL2.50ch04: 11959693-11973591 Solanum lycopersicum
Solyc04g040170.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch04: 11968592-11973591 Solanum lycopersicum
Solyc04g040170.2 5.0kb downstream 5.0kb downstream 13899 true SL2.50ch04: 11954693-11968591 Solanum lycopersicum
Solyc04g040170.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch04: 11954693-11959692 Solanum lycopersicum
Solyc04g040170.2 10.0kb upstream 10.0kb upstream 18899 true SL2.50ch04: 11959693-11978591 Solanum lycopersicum
Solyc04g040170.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch04: 11968592-11978591 Solanum lycopersicum
Solyc04g040170.2 10.0kb downstream 10.0kb downstream 18899 true SL2.50ch04: 11949693-11968591 Solanum lycopersicum
Solyc04g040170.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch04: 11949693-11959692 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478361 5263 Asterids View MSA
123741650 5271 Pentapetalae View MSA
122792617 5272 Eudicot View MSA
122051300 5273 Angiosperm View MSA
121352511 5274 Embryophyte View MSA
123382830 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain