Gene : Solyc04g040190.1 S. lycopersicum ITAG2.4
Defline:  (1 of 2) K06443 - lycopene beta-cyclase (lcyB, crtL1, crtY) Description:  Lycopene beta-cyclase 1
Genomic Order:  835 Name:  ? Solyc04g040190.1
Secondary Identifier:  ? PAC:36142746
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum CAROTENOID-PWY Solanum lycopersicum pathologic  
Slycopersicum PWY-5943 Solanum lycopersicum pathologic  
Slycopersicum PWY-5947 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc04g040190.1 0.5kb upstream 0.5kb upstream 2003 true SL2.50ch04: 11946553-11948555 Solanum lycopersicum
Solyc04g040190.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch04: 11946553-11947052 Solanum lycopersicum
Solyc04g040190.1 0.5kb downstream 0.5kb downstream 2003 true SL2.50ch04: 11947053-11949055 Solanum lycopersicum
Solyc04g040190.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch04: 11948556-11949055 Solanum lycopersicum
Solyc04g040190.1 1.0kb upstream 1.0kb upstream 2503 true SL2.50ch04: 11946053-11948555 Solanum lycopersicum
Solyc04g040190.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch04: 11946053-11947052 Solanum lycopersicum
Solyc04g040190.1 1.0kb downstream 1.0kb downstream 2503 true SL2.50ch04: 11947053-11949555 Solanum lycopersicum
Solyc04g040190.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch04: 11948556-11949555 Solanum lycopersicum
Solyc04g040190.1 2.0kb upstream 2.0kb upstream 3503 true SL2.50ch04: 11945053-11948555 Solanum lycopersicum
Solyc04g040190.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch04: 11945053-11947052 Solanum lycopersicum
Solyc04g040190.1 2.0kb downstream 2.0kb downstream 3503 true SL2.50ch04: 11947053-11950555 Solanum lycopersicum
Solyc04g040190.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch04: 11948556-11950555 Solanum lycopersicum
Solyc04g040190.1 5.0kb upstream 5.0kb upstream 6503 true SL2.50ch04: 11942053-11948555 Solanum lycopersicum
Solyc04g040190.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch04: 11942053-11947052 Solanum lycopersicum
Solyc04g040190.1 5.0kb downstream 5.0kb downstream 6503 true SL2.50ch04: 11947053-11953555 Solanum lycopersicum
Solyc04g040190.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch04: 11948556-11953555 Solanum lycopersicum
Solyc04g040190.1 10.0kb upstream 10.0kb upstream 11503 true SL2.50ch04: 11937053-11948555 Solanum lycopersicum
Solyc04g040190.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch04: 11937053-11947052 Solanum lycopersicum
Solyc04g040190.1 10.0kb downstream 10.0kb downstream 11503 true SL2.50ch04: 11947053-11958555 Solanum lycopersicum
Solyc04g040190.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch04: 11948556-11958555 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471743 5263 Asterids View MSA
123737595 5271 Pentapetalae View MSA
122786885 5272 Eudicot View MSA
122046204 5273 Angiosperm View MSA
121345644 5274 Embryophyte View MSA
123423874 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain