Gene : Solyc04g040200.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR11106//PTHR11106:SF64 - GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED // SUBFAMILY NOT NAMED Description:  Cellular retinaldehyde-binding/triple function C-terminal (AHRD V1 **-- Q2HW59_MEDTR); contains Interpro domain(s) IPR001251 Cellular retinaldehyde-binding/triple function, C-terminal
Genomic Order:  834 Name:  ? Solyc04g040200.2
Secondary Identifier:  ? PAC:36143990
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc04g040200.2 0.5kb upstream 0.5kb upstream 4827 true SL2.50ch04: 11942051-11946877 Solanum lycopersicum
Solyc04g040200.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch04: 11946378-11946877 Solanum lycopersicum
Solyc04g040200.2 0.5kb downstream 0.5kb downstream 4827 true SL2.50ch04: 11941551-11946377 Solanum lycopersicum
Solyc04g040200.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch04: 11941551-11942050 Solanum lycopersicum
Solyc04g040200.2 1.0kb upstream 1.0kb upstream 5327 true SL2.50ch04: 11942051-11947377 Solanum lycopersicum
Solyc04g040200.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch04: 11946378-11947377 Solanum lycopersicum
Solyc04g040200.2 1.0kb downstream 1.0kb downstream 5327 true SL2.50ch04: 11941051-11946377 Solanum lycopersicum
Solyc04g040200.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch04: 11941051-11942050 Solanum lycopersicum
Solyc04g040200.2 2.0kb upstream 2.0kb upstream 6327 true SL2.50ch04: 11942051-11948377 Solanum lycopersicum
Solyc04g040200.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch04: 11946378-11948377 Solanum lycopersicum
Solyc04g040200.2 2.0kb downstream 2.0kb downstream 6327 true SL2.50ch04: 11940051-11946377 Solanum lycopersicum
Solyc04g040200.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch04: 11940051-11942050 Solanum lycopersicum
Solyc04g040200.2 5.0kb upstream 5.0kb upstream 9327 true SL2.50ch04: 11942051-11951377 Solanum lycopersicum
Solyc04g040200.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch04: 11946378-11951377 Solanum lycopersicum
Solyc04g040200.2 5.0kb downstream 5.0kb downstream 9327 true SL2.50ch04: 11937051-11946377 Solanum lycopersicum
Solyc04g040200.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch04: 11937051-11942050 Solanum lycopersicum
Solyc04g040200.2 10.0kb upstream 10.0kb upstream 14327 true SL2.50ch04: 11942051-11956377 Solanum lycopersicum
Solyc04g040200.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch04: 11946378-11956377 Solanum lycopersicum
Solyc04g040200.2 10.0kb downstream 10.0kb downstream 14327 true SL2.50ch04: 11932051-11946377 Solanum lycopersicum
Solyc04g040200.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch04: 11932051-11942050 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472881 5263 Asterids View MSA
123751139 5271 Pentapetalae View MSA
122792169 5272 Eudicot View MSA
122046817 5273 Angiosperm View MSA
121349496 5274 Embryophyte View MSA
123425593 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain