Gene : Solyc04g039790.1 S. lycopersicum ITAG2.4
Defline:  (1 of 18) PTHR22773//PTHR22773:SF84 - NADH DEHYDROGENASE // SUBFAMILY NOT NAMED Description:  NAD(P)H-quinone oxidoreductase subunit 2 chloroplastic (AHRD V1 ***- D3WF39_9ROSI); contains Interpro domain(s) IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase
Genomic Order:  875 Name:  ? Solyc04g039790.1
Secondary Identifier:  ? PAC:36143918
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc04g039790.1 0.5kb upstream 0.5kb upstream 1150 true SL2.50ch04: 12541102-12542251 Solanum lycopersicum
Solyc04g039790.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch04: 12541102-12541601 Solanum lycopersicum
Solyc04g039790.1 0.5kb downstream 0.5kb downstream 1150 true SL2.50ch04: 12541602-12542751 Solanum lycopersicum
Solyc04g039790.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch04: 12542252-12542751 Solanum lycopersicum
Solyc04g039790.1 1.0kb upstream 1.0kb upstream 1650 true SL2.50ch04: 12540602-12542251 Solanum lycopersicum
Solyc04g039790.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch04: 12540602-12541601 Solanum lycopersicum
Solyc04g039790.1 1.0kb downstream 1.0kb downstream 1650 true SL2.50ch04: 12541602-12543251 Solanum lycopersicum
Solyc04g039790.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch04: 12542252-12543251 Solanum lycopersicum
Solyc04g039790.1 2.0kb upstream 2.0kb upstream 2650 true SL2.50ch04: 12539602-12542251 Solanum lycopersicum
Solyc04g039790.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch04: 12539602-12541601 Solanum lycopersicum
Solyc04g039790.1 2.0kb downstream 2.0kb downstream 2650 true SL2.50ch04: 12541602-12544251 Solanum lycopersicum
Solyc04g039790.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch04: 12542252-12544251 Solanum lycopersicum
Solyc04g039790.1 5.0kb upstream 5.0kb upstream 5650 true SL2.50ch04: 12536602-12542251 Solanum lycopersicum
Solyc04g039790.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch04: 12536602-12541601 Solanum lycopersicum
Solyc04g039790.1 5.0kb downstream 5.0kb downstream 5650 true SL2.50ch04: 12541602-12547251 Solanum lycopersicum
Solyc04g039790.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch04: 12542252-12547251 Solanum lycopersicum
Solyc04g039790.1 10.0kb upstream 10.0kb upstream 10650 true SL2.50ch04: 12531602-12542251 Solanum lycopersicum
Solyc04g039790.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch04: 12531602-12541601 Solanum lycopersicum
Solyc04g039790.1 10.0kb downstream 10.0kb downstream 10650 true SL2.50ch04: 12541602-12552251 Solanum lycopersicum
Solyc04g039790.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch04: 12542252-12552251 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480135 5263 Asterids View MSA
123753255 5271 Pentapetalae View MSA
122797410 5272 Eudicot View MSA
122049707 5273 Angiosperm View MSA
121351606 5274 Embryophyte View MSA
123428700 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain