Gene : Solyc04g039620.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR10210:SF45 - RIBOSE-PHOSPHATE PYROPHOSPHOKINASE 3, CHLOROPLASTIC Description:  Ribose-phosphate pyrophosphokinase 4 (AHRD V1 ***- B6SK13_MAIZE); contains Interpro domain(s) IPR000836 Phosphoribosyltransferase
Genomic Order:  891 Name:  ? Solyc04g039620.2
Secondary Identifier:  ? PAC:36142581
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY0-662 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc04g039620.2 0.5kb upstream 0.5kb upstream 17199 true SL2.50ch04: 13369921-13387119 Solanum lycopersicum
Solyc04g039620.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch04: 13386620-13387119 Solanum lycopersicum
Solyc04g039620.2 0.5kb downstream 0.5kb downstream 17199 true SL2.50ch04: 13369421-13386619 Solanum lycopersicum
Solyc04g039620.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch04: 13369421-13369920 Solanum lycopersicum
Solyc04g039620.2 1.0kb upstream 1.0kb upstream 17699 true SL2.50ch04: 13369921-13387619 Solanum lycopersicum
Solyc04g039620.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch04: 13386620-13387619 Solanum lycopersicum
Solyc04g039620.2 1.0kb downstream 1.0kb downstream 17699 true SL2.50ch04: 13368921-13386619 Solanum lycopersicum
Solyc04g039620.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch04: 13368921-13369920 Solanum lycopersicum
Solyc04g039620.2 2.0kb upstream 2.0kb upstream 18699 true SL2.50ch04: 13369921-13388619 Solanum lycopersicum
Solyc04g039620.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch04: 13386620-13388619 Solanum lycopersicum
Solyc04g039620.2 2.0kb downstream 2.0kb downstream 18699 true SL2.50ch04: 13367921-13386619 Solanum lycopersicum
Solyc04g039620.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch04: 13367921-13369920 Solanum lycopersicum
Solyc04g039620.2 5.0kb upstream 5.0kb upstream 21699 true SL2.50ch04: 13369921-13391619 Solanum lycopersicum
Solyc04g039620.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch04: 13386620-13391619 Solanum lycopersicum
Solyc04g039620.2 5.0kb downstream 5.0kb downstream 21699 true SL2.50ch04: 13364921-13386619 Solanum lycopersicum
Solyc04g039620.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch04: 13364921-13369920 Solanum lycopersicum
Solyc04g039620.2 10.0kb upstream 10.0kb upstream 26699 true SL2.50ch04: 13369921-13396619 Solanum lycopersicum
Solyc04g039620.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch04: 13386620-13396619 Solanum lycopersicum
Solyc04g039620.2 10.0kb downstream 10.0kb downstream 26699 true SL2.50ch04: 13359921-13386619 Solanum lycopersicum
Solyc04g039620.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch04: 13359921-13369920 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469713 5263 Asterids View MSA
123738172 5271 Pentapetalae View MSA
122787555 5272 Eudicot View MSA
122048410 5273 Angiosperm View MSA
121347977 5274 Embryophyte View MSA
123424356 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain