Gene : Solyc04g045590.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) 1.14.11.33//4.2.99.18 - DNA oxidative demethylase / Alkylated DNA repair protein // DNA-(apurinic or apyrimidinic site) lyase / Phage-T4 UV endonuclease Description:  Alpha-ketoglutarate-dependent dioxygenase AlkB (AHRD V1 *--* D5ALD4_RHOCB); contains Interpro domain(s) IPR005123 Oxoglutarate and iron-dependent oxygenase
Genomic Order:  1137 Name:  ? Solyc04g045590.2
Secondary Identifier:  ? PAC:36141755
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc04g045590.2 0.5kb upstream 0.5kb upstream 6330 true SL2.50ch04: 34258011-34264340 Solanum lycopersicum
Solyc04g045590.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch04: 34258011-34258510 Solanum lycopersicum
Solyc04g045590.2 0.5kb downstream 0.5kb downstream 6330 true SL2.50ch04: 34258511-34264840 Solanum lycopersicum
Solyc04g045590.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch04: 34264341-34264840 Solanum lycopersicum
Solyc04g045590.2 1.0kb upstream 1.0kb upstream 6830 true SL2.50ch04: 34257511-34264340 Solanum lycopersicum
Solyc04g045590.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch04: 34257511-34258510 Solanum lycopersicum
Solyc04g045590.2 1.0kb downstream 1.0kb downstream 6830 true SL2.50ch04: 34258511-34265340 Solanum lycopersicum
Solyc04g045590.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch04: 34264341-34265340 Solanum lycopersicum
Solyc04g045590.2 2.0kb upstream 2.0kb upstream 7830 true SL2.50ch04: 34256511-34264340 Solanum lycopersicum
Solyc04g045590.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch04: 34256511-34258510 Solanum lycopersicum
Solyc04g045590.2 2.0kb downstream 2.0kb downstream 7830 true SL2.50ch04: 34258511-34266340 Solanum lycopersicum
Solyc04g045590.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch04: 34264341-34266340 Solanum lycopersicum
Solyc04g045590.2 5.0kb upstream 5.0kb upstream 10830 true SL2.50ch04: 34253511-34264340 Solanum lycopersicum
Solyc04g045590.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch04: 34253511-34258510 Solanum lycopersicum
Solyc04g045590.2 5.0kb downstream 5.0kb downstream 10830 true SL2.50ch04: 34258511-34269340 Solanum lycopersicum
Solyc04g045590.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch04: 34264341-34269340 Solanum lycopersicum
Solyc04g045590.2 10.0kb upstream 10.0kb upstream 15830 true SL2.50ch04: 34248511-34264340 Solanum lycopersicum
Solyc04g045590.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch04: 34248511-34258510 Solanum lycopersicum
Solyc04g045590.2 10.0kb downstream 10.0kb downstream 15830 true SL2.50ch04: 34258511-34274340 Solanum lycopersicum
Solyc04g045590.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch04: 34264341-34274340 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467947 5263 Asterids View MSA
123737272 5271 Pentapetalae View MSA
122785941 5272 Eudicot View MSA
122044879 5273 Angiosperm View MSA
121344923 5274 Embryophyte View MSA
123425704 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain