Gene : Solyc04g045480.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K09602 - ubiquitin thioesterase protein OTUB1 [EC:3.4.19.12] (OTUB1) Description:  Ubiquitin thioesterase otubain-like protein (AHRD V1 **** D3TRD1_GLOMM); contains Interpro domain(s) IPR016615 Ubiquitin thioesterase Otubain
Genomic Order:  1127 Name:  ? Solyc04g045480.2
Secondary Identifier:  ? PAC:36143088
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc04g045480.2 0.5kb upstream 0.5kb upstream 9573 true SL2.50ch04: 33671178-33680750 Solanum lycopersicum
Solyc04g045480.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch04: 33671178-33671677 Solanum lycopersicum
Solyc04g045480.2 0.5kb downstream 0.5kb downstream 9573 true SL2.50ch04: 33671678-33681250 Solanum lycopersicum
Solyc04g045480.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch04: 33680751-33681250 Solanum lycopersicum
Solyc04g045480.2 1.0kb upstream 1.0kb upstream 10073 true SL2.50ch04: 33670678-33680750 Solanum lycopersicum
Solyc04g045480.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch04: 33670678-33671677 Solanum lycopersicum
Solyc04g045480.2 1.0kb downstream 1.0kb downstream 10073 true SL2.50ch04: 33671678-33681750 Solanum lycopersicum
Solyc04g045480.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch04: 33680751-33681750 Solanum lycopersicum
Solyc04g045480.2 2.0kb upstream 2.0kb upstream 11073 true SL2.50ch04: 33669678-33680750 Solanum lycopersicum
Solyc04g045480.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch04: 33669678-33671677 Solanum lycopersicum
Solyc04g045480.2 2.0kb downstream 2.0kb downstream 11073 true SL2.50ch04: 33671678-33682750 Solanum lycopersicum
Solyc04g045480.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch04: 33680751-33682750 Solanum lycopersicum
Solyc04g045480.2 5.0kb upstream 5.0kb upstream 14073 true SL2.50ch04: 33666678-33680750 Solanum lycopersicum
Solyc04g045480.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch04: 33666678-33671677 Solanum lycopersicum
Solyc04g045480.2 5.0kb downstream 5.0kb downstream 14073 true SL2.50ch04: 33671678-33685750 Solanum lycopersicum
Solyc04g045480.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch04: 33680751-33685750 Solanum lycopersicum
Solyc04g045480.2 10.0kb upstream 10.0kb upstream 19073 true SL2.50ch04: 33661678-33680750 Solanum lycopersicum
Solyc04g045480.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch04: 33661678-33671677 Solanum lycopersicum
Solyc04g045480.2 10.0kb downstream 10.0kb downstream 19073 true SL2.50ch04: 33671678-33690750 Solanum lycopersicum
Solyc04g045480.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch04: 33680751-33690750 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468698 5263 Asterids View MSA
123752549 5271 Pentapetalae View MSA
122787068 5272 Eudicot View MSA
122043006 5273 Angiosperm View MSA
121344850 5274 Embryophyte View MSA
123424451 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain