Gene : Solyc04g045340.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR22573:SF47 - PHOSPHOGLUCOMUTASE, CYTOPLASMIC 1-RELATED Description:  Phosphoglucomutase (AHRD V1 **** Q9AUQ4_ORYSA); contains Interpro domain(s) IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I, II and III
Genomic Order:  1117 Name:  ? Solyc04g045340.2
Secondary Identifier:  ? PAC:36142114
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum GLUCOSE1PMETAB-PWY Solanum lycopersicum pathologic  
Slycopersicum GLYCOGENSYNTH-PWY Solanum lycopersicum pathologic  
Slycopersicum PWY-3801 Solanum lycopersicum pathologic  
Slycopersicum PWY-622 Solanum lycopersicum pathologic  
Slycopersicum PWY66-422 Solanum lycopersicum pathologic  
Slycopersicum PWY-7238 Solanum lycopersicum pathologic  
Slycopersicum PWY-7343 Solanum lycopersicum pathologic  
Slycopersicum SUCSYN-PWY Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc04g045340.2 0.5kb upstream 0.5kb upstream 15643 true SL2.50ch04: 32494190-32509832 Solanum lycopersicum
Solyc04g045340.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch04: 32494190-32494689 Solanum lycopersicum
Solyc04g045340.2 0.5kb downstream 0.5kb downstream 15643 true SL2.50ch04: 32494690-32510332 Solanum lycopersicum
Solyc04g045340.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch04: 32509833-32510332 Solanum lycopersicum
Solyc04g045340.2 1.0kb upstream 1.0kb upstream 16143 true SL2.50ch04: 32493690-32509832 Solanum lycopersicum
Solyc04g045340.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch04: 32493690-32494689 Solanum lycopersicum
Solyc04g045340.2 1.0kb downstream 1.0kb downstream 16143 true SL2.50ch04: 32494690-32510832 Solanum lycopersicum
Solyc04g045340.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch04: 32509833-32510832 Solanum lycopersicum
Solyc04g045340.2 2.0kb upstream 2.0kb upstream 17143 true SL2.50ch04: 32492690-32509832 Solanum lycopersicum
Solyc04g045340.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch04: 32492690-32494689 Solanum lycopersicum
Solyc04g045340.2 2.0kb downstream 2.0kb downstream 17143 true SL2.50ch04: 32494690-32511832 Solanum lycopersicum
Solyc04g045340.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch04: 32509833-32511832 Solanum lycopersicum
Solyc04g045340.2 5.0kb upstream 5.0kb upstream 20143 true SL2.50ch04: 32489690-32509832 Solanum lycopersicum
Solyc04g045340.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch04: 32489690-32494689 Solanum lycopersicum
Solyc04g045340.2 5.0kb downstream 5.0kb downstream 20143 true SL2.50ch04: 32494690-32514832 Solanum lycopersicum
Solyc04g045340.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch04: 32509833-32514832 Solanum lycopersicum
Solyc04g045340.2 10.0kb upstream 10.0kb upstream 25143 true SL2.50ch04: 32484690-32509832 Solanum lycopersicum
Solyc04g045340.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch04: 32484690-32494689 Solanum lycopersicum
Solyc04g045340.2 10.0kb downstream 10.0kb downstream 25143 true SL2.50ch04: 32494690-32519832 Solanum lycopersicum
Solyc04g045340.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch04: 32509833-32519832 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473423 5263 Asterids View MSA
123740036 5271 Pentapetalae View MSA
122791577 5272 Eudicot View MSA
122046067 5273 Angiosperm View MSA
121346784 5274 Embryophyte View MSA
123426013 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain