Gene : Solyc04g051660.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PF14559 - Tetratricopeptide repeat (TPR_19) Description:  TPR repeat (AHRD V1 *-*- Q31KV9_SYNE7); contains Interpro domain(s) IPR011990 Tetratricopeptide-like helical
Genomic Order:  1426 Name:  ? Solyc04g051660.2
Secondary Identifier:  ? PAC:36142325
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-7437 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc04g051660.2 0.5kb upstream 0.5kb upstream 4894 true SL2.50ch04: 50948359-50953252 Solanum lycopersicum
Solyc04g051660.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch04: 50952753-50953252 Solanum lycopersicum
Solyc04g051660.2 0.5kb downstream 0.5kb downstream 4894 true SL2.50ch04: 50947859-50952752 Solanum lycopersicum
Solyc04g051660.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch04: 50947859-50948358 Solanum lycopersicum
Solyc04g051660.2 1.0kb upstream 1.0kb upstream 5394 true SL2.50ch04: 50948359-50953752 Solanum lycopersicum
Solyc04g051660.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch04: 50952753-50953752 Solanum lycopersicum
Solyc04g051660.2 1.0kb downstream 1.0kb downstream 5394 true SL2.50ch04: 50947359-50952752 Solanum lycopersicum
Solyc04g051660.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch04: 50947359-50948358 Solanum lycopersicum
Solyc04g051660.2 2.0kb upstream 2.0kb upstream 6394 true SL2.50ch04: 50948359-50954752 Solanum lycopersicum
Solyc04g051660.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch04: 50952753-50954752 Solanum lycopersicum
Solyc04g051660.2 2.0kb downstream 2.0kb downstream 6394 true SL2.50ch04: 50946359-50952752 Solanum lycopersicum
Solyc04g051660.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch04: 50946359-50948358 Solanum lycopersicum
Solyc04g051660.2 5.0kb upstream 5.0kb upstream 9394 true SL2.50ch04: 50948359-50957752 Solanum lycopersicum
Solyc04g051660.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch04: 50952753-50957752 Solanum lycopersicum
Solyc04g051660.2 5.0kb downstream 5.0kb downstream 9394 true SL2.50ch04: 50943359-50952752 Solanum lycopersicum
Solyc04g051660.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch04: 50943359-50948358 Solanum lycopersicum
Solyc04g051660.2 10.0kb upstream 10.0kb upstream 14394 true SL2.50ch04: 50948359-50962752 Solanum lycopersicum
Solyc04g051660.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch04: 50952753-50962752 Solanum lycopersicum
Solyc04g051660.2 10.0kb downstream 10.0kb downstream 14394 true SL2.50ch04: 50938359-50952752 Solanum lycopersicum
Solyc04g051660.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch04: 50938359-50948358 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466775 5263 Asterids View MSA
123736679 5271 Pentapetalae View MSA
122790556 5272 Eudicot View MSA
122050724 5273 Angiosperm View MSA
121348352 5274 Embryophyte View MSA
123426406 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain