Gene : Solyc04g050480.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K07573 - exosome complex component CSL4 (CSL4, EXOSC1) Description:  3-5 exoribonuclease CSL4 (AHRD V1 ***- B6T1M3_MAIZE); contains Interpro domain(s) IPR019495 Exosome complex, component CSL4
Genomic Order:  1319 Name:  ? Solyc04g050480.2
Secondary Identifier:  ? PAC:36143140
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc04g050480.2 0.5kb upstream 0.5kb upstream 7111 true SL2.50ch04: 47286265-47293375 Solanum lycopersicum
Solyc04g050480.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch04: 47292876-47293375 Solanum lycopersicum
Solyc04g050480.2 0.5kb downstream 0.5kb downstream 7111 true SL2.50ch04: 47285765-47292875 Solanum lycopersicum
Solyc04g050480.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch04: 47285765-47286264 Solanum lycopersicum
Solyc04g050480.2 1.0kb upstream 1.0kb upstream 7611 true SL2.50ch04: 47286265-47293875 Solanum lycopersicum
Solyc04g050480.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch04: 47292876-47293875 Solanum lycopersicum
Solyc04g050480.2 1.0kb downstream 1.0kb downstream 7611 true SL2.50ch04: 47285265-47292875 Solanum lycopersicum
Solyc04g050480.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch04: 47285265-47286264 Solanum lycopersicum
Solyc04g050480.2 2.0kb upstream 2.0kb upstream 8611 true SL2.50ch04: 47286265-47294875 Solanum lycopersicum
Solyc04g050480.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch04: 47292876-47294875 Solanum lycopersicum
Solyc04g050480.2 2.0kb downstream 2.0kb downstream 8611 true SL2.50ch04: 47284265-47292875 Solanum lycopersicum
Solyc04g050480.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch04: 47284265-47286264 Solanum lycopersicum
Solyc04g050480.2 5.0kb upstream 5.0kb upstream 11611 true SL2.50ch04: 47286265-47297875 Solanum lycopersicum
Solyc04g050480.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch04: 47292876-47297875 Solanum lycopersicum
Solyc04g050480.2 5.0kb downstream 5.0kb downstream 11611 true SL2.50ch04: 47281265-47292875 Solanum lycopersicum
Solyc04g050480.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch04: 47281265-47286264 Solanum lycopersicum
Solyc04g050480.2 10.0kb upstream 10.0kb upstream 16611 true SL2.50ch04: 47286265-47302875 Solanum lycopersicum
Solyc04g050480.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch04: 47292876-47302875 Solanum lycopersicum
Solyc04g050480.2 10.0kb downstream 10.0kb downstream 16611 true SL2.50ch04: 47276265-47292875 Solanum lycopersicum
Solyc04g050480.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch04: 47276265-47286264 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026382 5273 Angiosperm View MSA
121474249 5263 Asterids View MSA
123740453 5271 Pentapetalae View MSA
122786772 5272 Eudicot View MSA
121347552 5274 Embryophyte View MSA
123423947 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain