Gene : Solyc04g050110.1 S. lycopersicum ITAG2.4
Defline:  (1 of 14) 1.13.11.58 - Linoleate 9S-lipoxygenase / Linoleate 9-lipoxygenase Description:  Lipoxygenase (AHRD V1 ***- Q9FT17_SOLLC); contains Interpro domain(s) IPR000907 Lipoxygenase
Genomic Order:  1284 Name:  ? Solyc04g050110.1
Secondary Identifier:  ? PAC:36144068
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-5406 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc04g050110.1 0.5kb upstream 0.5kb upstream 928 true SL2.50ch04: 45581796-45582723 Solanum lycopersicum
Solyc04g050110.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch04: 45582224-45582723 Solanum lycopersicum
Solyc04g050110.1 0.5kb downstream 0.5kb downstream 928 true SL2.50ch04: 45581296-45582223 Solanum lycopersicum
Solyc04g050110.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch04: 45581296-45581795 Solanum lycopersicum
Solyc04g050110.1 1.0kb upstream 1.0kb upstream 1428 true SL2.50ch04: 45581796-45583223 Solanum lycopersicum
Solyc04g050110.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch04: 45582224-45583223 Solanum lycopersicum
Solyc04g050110.1 1.0kb downstream 1.0kb downstream 1428 true SL2.50ch04: 45580796-45582223 Solanum lycopersicum
Solyc04g050110.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch04: 45580796-45581795 Solanum lycopersicum
Solyc04g050110.1 2.0kb upstream 2.0kb upstream 2428 true SL2.50ch04: 45581796-45584223 Solanum lycopersicum
Solyc04g050110.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch04: 45582224-45584223 Solanum lycopersicum
Solyc04g050110.1 2.0kb downstream 2.0kb downstream 2428 true SL2.50ch04: 45579796-45582223 Solanum lycopersicum
Solyc04g050110.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch04: 45579796-45581795 Solanum lycopersicum
Solyc04g050110.1 5.0kb upstream 5.0kb upstream 5428 true SL2.50ch04: 45581796-45587223 Solanum lycopersicum
Solyc04g050110.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch04: 45582224-45587223 Solanum lycopersicum
Solyc04g050110.1 5.0kb downstream 5.0kb downstream 5428 true SL2.50ch04: 45576796-45582223 Solanum lycopersicum
Solyc04g050110.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch04: 45576796-45581795 Solanum lycopersicum
Solyc04g050110.1 10.0kb upstream 10.0kb upstream 10428 true SL2.50ch04: 45581796-45592223 Solanum lycopersicum
Solyc04g050110.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch04: 45582224-45592223 Solanum lycopersicum
Solyc04g050110.1 10.0kb downstream 10.0kb downstream 10428 true SL2.50ch04: 45571796-45582223 Solanum lycopersicum
Solyc04g050110.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch04: 45571796-45581795 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121385146 5263 Asterids View MSA
123750087 5271 Pentapetalae View MSA
122788853 5272 Eudicot View MSA
122051623 5273 Angiosperm View MSA
123429188 5275 Viridiplantae View MSA
121351701 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain