Gene : Solyc04g050140.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR17204//PTHR17204:SF30 - PRE-MRNA PROCESSING PROTEIN PRP39-RELATED // SUBFAMILY NOT NAMED Description:  Genomic DNA chromosome 5 P1 clone MRH10 (AHRD V1 **-- Q9FND1_ARATH); contains Interpro domain(s) IPR009291 Protein of unknown function DUF946, plant
Genomic Order:  1286 Name:  ? Solyc04g050140.2
Secondary Identifier:  ? PAC:36144020
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc04g050140.2 0.5kb upstream 0.5kb upstream 3057 true SL2.50ch04: 45652795-45655851 Solanum lycopersicum
Solyc04g050140.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch04: 45652795-45653294 Solanum lycopersicum
Solyc04g050140.2 0.5kb downstream 0.5kb downstream 3057 true SL2.50ch04: 45653295-45656351 Solanum lycopersicum
Solyc04g050140.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch04: 45655852-45656351 Solanum lycopersicum
Solyc04g050140.2 1.0kb upstream 1.0kb upstream 3557 true SL2.50ch04: 45652295-45655851 Solanum lycopersicum
Solyc04g050140.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch04: 45652295-45653294 Solanum lycopersicum
Solyc04g050140.2 1.0kb downstream 1.0kb downstream 3557 true SL2.50ch04: 45653295-45656851 Solanum lycopersicum
Solyc04g050140.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch04: 45655852-45656851 Solanum lycopersicum
Solyc04g050140.2 2.0kb upstream 2.0kb upstream 4557 true SL2.50ch04: 45651295-45655851 Solanum lycopersicum
Solyc04g050140.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch04: 45651295-45653294 Solanum lycopersicum
Solyc04g050140.2 2.0kb downstream 2.0kb downstream 4557 true SL2.50ch04: 45653295-45657851 Solanum lycopersicum
Solyc04g050140.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch04: 45655852-45657851 Solanum lycopersicum
Solyc04g050140.2 5.0kb upstream 5.0kb upstream 7557 true SL2.50ch04: 45648295-45655851 Solanum lycopersicum
Solyc04g050140.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch04: 45648295-45653294 Solanum lycopersicum
Solyc04g050140.2 5.0kb downstream 5.0kb downstream 7557 true SL2.50ch04: 45653295-45660851 Solanum lycopersicum
Solyc04g050140.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch04: 45655852-45660851 Solanum lycopersicum
Solyc04g050140.2 10.0kb upstream 10.0kb upstream 12557 true SL2.50ch04: 45643295-45655851 Solanum lycopersicum
Solyc04g050140.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch04: 45643295-45653294 Solanum lycopersicum
Solyc04g050140.2 10.0kb downstream 10.0kb downstream 12557 true SL2.50ch04: 45653295-45665851 Solanum lycopersicum
Solyc04g050140.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch04: 45655852-45665851 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479839 5263 Asterids View MSA
123746638 5271 Pentapetalae View MSA
122792580 5272 Eudicot View MSA
122047878 5273 Angiosperm View MSA
121349100 5274 Embryophyte View MSA
123426825 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain