Gene : Solyc04g015940.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR21576:SF19 - ARM REPEAT SUPERFAMILY PROTEIN Description:  Ribosomal RNA-processing protein (AHRD V1 *--- C1GNI2_PARBA); contains Interpro domain(s) IPR016024 Armadillo-type fold
Genomic Order:  692 Name:  ? Solyc04g015940.2
Secondary Identifier:  ? PAC:36142993
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc04g015940.2 0.5kb upstream 0.5kb upstream 24445 true SL2.50ch04: 6462461-6486905 Solanum lycopersicum
Solyc04g015940.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch04: 6462461-6462960 Solanum lycopersicum
Solyc04g015940.2 0.5kb downstream 0.5kb downstream 24445 true SL2.50ch04: 6462961-6487405 Solanum lycopersicum
Solyc04g015940.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch04: 6486906-6487405 Solanum lycopersicum
Solyc04g015940.2 1.0kb upstream 1.0kb upstream 24945 true SL2.50ch04: 6461961-6486905 Solanum lycopersicum
Solyc04g015940.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch04: 6461961-6462960 Solanum lycopersicum
Solyc04g015940.2 1.0kb downstream 1.0kb downstream 24945 true SL2.50ch04: 6462961-6487905 Solanum lycopersicum
Solyc04g015940.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch04: 6486906-6487905 Solanum lycopersicum
Solyc04g015940.2 2.0kb upstream 2.0kb upstream 25945 true SL2.50ch04: 6460961-6486905 Solanum lycopersicum
Solyc04g015940.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch04: 6460961-6462960 Solanum lycopersicum
Solyc04g015940.2 2.0kb downstream 2.0kb downstream 25945 true SL2.50ch04: 6462961-6488905 Solanum lycopersicum
Solyc04g015940.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch04: 6486906-6488905 Solanum lycopersicum
Solyc04g015940.2 5.0kb upstream 5.0kb upstream 28945 true SL2.50ch04: 6457961-6486905 Solanum lycopersicum
Solyc04g015940.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch04: 6457961-6462960 Solanum lycopersicum
Solyc04g015940.2 5.0kb downstream 5.0kb downstream 28945 true SL2.50ch04: 6462961-6491905 Solanum lycopersicum
Solyc04g015940.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch04: 6486906-6491905 Solanum lycopersicum
Solyc04g015940.2 10.0kb upstream 10.0kb upstream 33945 true SL2.50ch04: 6452961-6486905 Solanum lycopersicum
Solyc04g015940.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch04: 6452961-6462960 Solanum lycopersicum
Solyc04g015940.2 10.0kb downstream 10.0kb downstream 33945 true SL2.50ch04: 6462961-6496905 Solanum lycopersicum
Solyc04g015940.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch04: 6486906-6496905 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468334 5263 Asterids View MSA
123738418 5271 Pentapetalae View MSA
122786075 5272 Eudicot View MSA
122044020 5273 Angiosperm View MSA
121310227 5274 Embryophyte View MSA
123347775 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain