Gene : Solyc04g015080.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR31573:SF1 - ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB HOMOLOG 2 Description:  Alkylated DNA repair protein (AHRD V1 **** A6EGN8_9SPHI)
Genomic Order:  608 Name:  ? Solyc04g015080.2
Secondary Identifier:  ? PAC:36143203
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc04g015080.2 0.5kb upstream 0.5kb upstream 3663 true SL2.50ch04: 5267187-5270849 Solanum lycopersicum
Solyc04g015080.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch04: 5267187-5267686 Solanum lycopersicum
Solyc04g015080.2 0.5kb downstream 0.5kb downstream 3663 true SL2.50ch04: 5267687-5271349 Solanum lycopersicum
Solyc04g015080.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch04: 5270850-5271349 Solanum lycopersicum
Solyc04g015080.2 1.0kb upstream 1.0kb upstream 4163 true SL2.50ch04: 5266687-5270849 Solanum lycopersicum
Solyc04g015080.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch04: 5266687-5267686 Solanum lycopersicum
Solyc04g015080.2 1.0kb downstream 1.0kb downstream 4163 true SL2.50ch04: 5267687-5271849 Solanum lycopersicum
Solyc04g015080.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch04: 5270850-5271849 Solanum lycopersicum
Solyc04g015080.2 2.0kb upstream 2.0kb upstream 5163 true SL2.50ch04: 5265687-5270849 Solanum lycopersicum
Solyc04g015080.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch04: 5265687-5267686 Solanum lycopersicum
Solyc04g015080.2 2.0kb downstream 2.0kb downstream 5163 true SL2.50ch04: 5267687-5272849 Solanum lycopersicum
Solyc04g015080.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch04: 5270850-5272849 Solanum lycopersicum
Solyc04g015080.2 5.0kb upstream 5.0kb upstream 8163 true SL2.50ch04: 5262687-5270849 Solanum lycopersicum
Solyc04g015080.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch04: 5262687-5267686 Solanum lycopersicum
Solyc04g015080.2 5.0kb downstream 5.0kb downstream 8163 true SL2.50ch04: 5267687-5275849 Solanum lycopersicum
Solyc04g015080.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch04: 5270850-5275849 Solanum lycopersicum
Solyc04g015080.2 10.0kb upstream 10.0kb upstream 13163 true SL2.50ch04: 5257687-5270849 Solanum lycopersicum
Solyc04g015080.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch04: 5257687-5267686 Solanum lycopersicum
Solyc04g015080.2 10.0kb downstream 10.0kb downstream 13163 true SL2.50ch04: 5267687-5280849 Solanum lycopersicum
Solyc04g015080.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch04: 5270850-5280849 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121476313 5263 Asterids View MSA
123749996 5271 Pentapetalae View MSA
122791674 5272 Eudicot View MSA
122048951 5273 Angiosperm View MSA
121351428 5274 Embryophyte View MSA
123423770 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain