Gene : Solyc04g015050.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR20902 - 41-2 PROTEIN ANTIGEN-RELATED Description:  Trafficking protein particle complex subunit 5 (AHRD V1 ***- C1BHU1_ONCMY); contains Interpro domain(s) IPR016696 TRAPP I complex, Trs31
Genomic Order:  605 Name:  ? Solyc04g015050.2
Secondary Identifier:  ? PAC:36142677
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc04g015050.2 0.5kb upstream 0.5kb upstream 6631 true SL2.50ch04: 5249008-5255638 Solanum lycopersicum
Solyc04g015050.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch04: 5249008-5249507 Solanum lycopersicum
Solyc04g015050.2 0.5kb downstream 0.5kb downstream 6631 true SL2.50ch04: 5249508-5256138 Solanum lycopersicum
Solyc04g015050.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch04: 5255639-5256138 Solanum lycopersicum
Solyc04g015050.2 1.0kb upstream 1.0kb upstream 7131 true SL2.50ch04: 5248508-5255638 Solanum lycopersicum
Solyc04g015050.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch04: 5248508-5249507 Solanum lycopersicum
Solyc04g015050.2 1.0kb downstream 1.0kb downstream 7131 true SL2.50ch04: 5249508-5256638 Solanum lycopersicum
Solyc04g015050.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch04: 5255639-5256638 Solanum lycopersicum
Solyc04g015050.2 2.0kb upstream 2.0kb upstream 8131 true SL2.50ch04: 5247508-5255638 Solanum lycopersicum
Solyc04g015050.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch04: 5247508-5249507 Solanum lycopersicum
Solyc04g015050.2 2.0kb downstream 2.0kb downstream 8131 true SL2.50ch04: 5249508-5257638 Solanum lycopersicum
Solyc04g015050.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch04: 5255639-5257638 Solanum lycopersicum
Solyc04g015050.2 5.0kb upstream 5.0kb upstream 11131 true SL2.50ch04: 5244508-5255638 Solanum lycopersicum
Solyc04g015050.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch04: 5244508-5249507 Solanum lycopersicum
Solyc04g015050.2 5.0kb downstream 5.0kb downstream 11131 true SL2.50ch04: 5249508-5260638 Solanum lycopersicum
Solyc04g015050.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch04: 5255639-5260638 Solanum lycopersicum
Solyc04g015050.2 10.0kb upstream 10.0kb upstream 16131 true SL2.50ch04: 5239508-5255638 Solanum lycopersicum
Solyc04g015050.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch04: 5239508-5249507 Solanum lycopersicum
Solyc04g015050.2 10.0kb downstream 10.0kb downstream 16131 true SL2.50ch04: 5249508-5265638 Solanum lycopersicum
Solyc04g015050.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch04: 5255639-5265638 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475873 5263 Asterids View MSA
123745459 5271 Pentapetalae View MSA
122785825 5272 Eudicot View MSA
122045467 5273 Angiosperm View MSA
121344565 5274 Embryophyte View MSA
123425941 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain