Gene : Solyc04g015440.2 S. lycopersicum ITAG2.4
Defline:  (1 of 10) PF12854//PF13041 - PPR repeat (PPR_1) // PPR repeat family (PPR_2) Description:  Pentatricopeptide repeat-containing protein (AHRD V1 ***- D7L610_ARALY); contains Interpro domain(s) IPR002885 Pentatricopeptide repeat
Genomic Order:  643 Name:  ? Solyc04g015440.2
Secondary Identifier:  ? PAC:36142652
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc04g015440.2 0.5kb upstream 0.5kb upstream 4131 true SL2.50ch04: 5627790-5631920 Solanum lycopersicum
Solyc04g015440.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch04: 5627790-5628289 Solanum lycopersicum
Solyc04g015440.2 0.5kb downstream 0.5kb downstream 4131 true SL2.50ch04: 5628290-5632420 Solanum lycopersicum
Solyc04g015440.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch04: 5631921-5632420 Solanum lycopersicum
Solyc04g015440.2 1.0kb upstream 1.0kb upstream 4631 true SL2.50ch04: 5627290-5631920 Solanum lycopersicum
Solyc04g015440.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch04: 5627290-5628289 Solanum lycopersicum
Solyc04g015440.2 1.0kb downstream 1.0kb downstream 4631 true SL2.50ch04: 5628290-5632920 Solanum lycopersicum
Solyc04g015440.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch04: 5631921-5632920 Solanum lycopersicum
Solyc04g015440.2 2.0kb upstream 2.0kb upstream 5631 true SL2.50ch04: 5626290-5631920 Solanum lycopersicum
Solyc04g015440.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch04: 5626290-5628289 Solanum lycopersicum
Solyc04g015440.2 2.0kb downstream 2.0kb downstream 5631 true SL2.50ch04: 5628290-5633920 Solanum lycopersicum
Solyc04g015440.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch04: 5631921-5633920 Solanum lycopersicum
Solyc04g015440.2 5.0kb upstream 5.0kb upstream 8631 true SL2.50ch04: 5623290-5631920 Solanum lycopersicum
Solyc04g015440.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch04: 5623290-5628289 Solanum lycopersicum
Solyc04g015440.2 5.0kb downstream 5.0kb downstream 8631 true SL2.50ch04: 5628290-5636920 Solanum lycopersicum
Solyc04g015440.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch04: 5631921-5636920 Solanum lycopersicum
Solyc04g015440.2 10.0kb upstream 10.0kb upstream 13631 true SL2.50ch04: 5618290-5631920 Solanum lycopersicum
Solyc04g015440.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch04: 5618290-5628289 Solanum lycopersicum
Solyc04g015440.2 10.0kb downstream 10.0kb downstream 13631 true SL2.50ch04: 5628290-5641920 Solanum lycopersicum
Solyc04g015440.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch04: 5631921-5641920 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467968 5263 Asterids View MSA
123737281 5271 Pentapetalae View MSA
122788345 5272 Eudicot View MSA
122045330 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain