Gene : Solyc04g015310.1 S. lycopersicum ITAG2.4
Defline:  (1 of 69) PF03108 - MuDR family transposase (DBD_Tnp_Mut) Description:  Unknown Protein (AHRD V1); contains Interpro domain(s) IPR004332 Transposase, MuDR, plant
Genomic Order:  631 Name:  ? Solyc04g015310.1
Secondary Identifier:  ? PAC:36143601
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc04g015310.1 0.5kb upstream 0.5kb upstream 2012 true SL2.50ch04: 5513243-5515254 Solanum lycopersicum
Solyc04g015310.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch04: 5513243-5513742 Solanum lycopersicum
Solyc04g015310.1 0.5kb downstream 0.5kb downstream 2012 true SL2.50ch04: 5513743-5515754 Solanum lycopersicum
Solyc04g015310.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch04: 5515255-5515754 Solanum lycopersicum
Solyc04g015310.1 1.0kb upstream 1.0kb upstream 2512 true SL2.50ch04: 5512743-5515254 Solanum lycopersicum
Solyc04g015310.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch04: 5512743-5513742 Solanum lycopersicum
Solyc04g015310.1 1.0kb downstream 1.0kb downstream 2512 true SL2.50ch04: 5513743-5516254 Solanum lycopersicum
Solyc04g015310.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch04: 5515255-5516254 Solanum lycopersicum
Solyc04g015310.1 2.0kb upstream 2.0kb upstream 3512 true SL2.50ch04: 5511743-5515254 Solanum lycopersicum
Solyc04g015310.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch04: 5511743-5513742 Solanum lycopersicum
Solyc04g015310.1 2.0kb downstream 2.0kb downstream 3512 true SL2.50ch04: 5513743-5517254 Solanum lycopersicum
Solyc04g015310.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch04: 5515255-5517254 Solanum lycopersicum
Solyc04g015310.1 5.0kb upstream 5.0kb upstream 6512 true SL2.50ch04: 5508743-5515254 Solanum lycopersicum
Solyc04g015310.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch04: 5508743-5513742 Solanum lycopersicum
Solyc04g015310.1 5.0kb downstream 5.0kb downstream 6512 true SL2.50ch04: 5513743-5520254 Solanum lycopersicum
Solyc04g015310.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch04: 5515255-5520254 Solanum lycopersicum
Solyc04g015310.1 10.0kb upstream 10.0kb upstream 11512 true SL2.50ch04: 5503743-5515254 Solanum lycopersicum
Solyc04g015310.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch04: 5503743-5513742 Solanum lycopersicum
Solyc04g015310.1 10.0kb downstream 10.0kb downstream 11512 true SL2.50ch04: 5513743-5525254 Solanum lycopersicum
Solyc04g015310.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch04: 5515255-5525254 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121782580 5273 Angiosperm View MSA
121367234 5263 Asterids Singleton cluster - no MSA
123753270 5271 Pentapetalae View MSA
122775022 5272 Eudicot View MSA
121054091 5274 Embryophyte View MSA
123094089 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain