Gene : Solyc04g024420.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) K02739 - 20S proteasome subunit beta 2 (PSMB7) Description:  Proteasome subunit beta type (AHRD V1 ***- A9PCK6_POPTR); contains Interpro domain(s) IPR000243 Peptidase T1A, proteasome beta-subunit
Genomic Order:  1102 Name:  ? Solyc04g024420.2
Secondary Identifier:  ? PAC:36141443
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc04g024420.2 0.5kb upstream 0.5kb upstream 6271 true SL2.50ch04: 31571616-31577886 Solanum lycopersicum
Solyc04g024420.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch04: 31571616-31572115 Solanum lycopersicum
Solyc04g024420.2 0.5kb downstream 0.5kb downstream 6271 true SL2.50ch04: 31572116-31578386 Solanum lycopersicum
Solyc04g024420.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch04: 31577887-31578386 Solanum lycopersicum
Solyc04g024420.2 1.0kb upstream 1.0kb upstream 6771 true SL2.50ch04: 31571116-31577886 Solanum lycopersicum
Solyc04g024420.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch04: 31571116-31572115 Solanum lycopersicum
Solyc04g024420.2 1.0kb downstream 1.0kb downstream 6771 true SL2.50ch04: 31572116-31578886 Solanum lycopersicum
Solyc04g024420.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch04: 31577887-31578886 Solanum lycopersicum
Solyc04g024420.2 2.0kb upstream 2.0kb upstream 7771 true SL2.50ch04: 31570116-31577886 Solanum lycopersicum
Solyc04g024420.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch04: 31570116-31572115 Solanum lycopersicum
Solyc04g024420.2 2.0kb downstream 2.0kb downstream 7771 true SL2.50ch04: 31572116-31579886 Solanum lycopersicum
Solyc04g024420.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch04: 31577887-31579886 Solanum lycopersicum
Solyc04g024420.2 5.0kb upstream 5.0kb upstream 10771 true SL2.50ch04: 31567116-31577886 Solanum lycopersicum
Solyc04g024420.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch04: 31567116-31572115 Solanum lycopersicum
Solyc04g024420.2 5.0kb downstream 5.0kb downstream 10771 true SL2.50ch04: 31572116-31582886 Solanum lycopersicum
Solyc04g024420.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch04: 31577887-31582886 Solanum lycopersicum
Solyc04g024420.2 10.0kb upstream 10.0kb upstream 15771 true SL2.50ch04: 31562116-31577886 Solanum lycopersicum
Solyc04g024420.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch04: 31562116-31572115 Solanum lycopersicum
Solyc04g024420.2 10.0kb downstream 10.0kb downstream 15771 true SL2.50ch04: 31572116-31587886 Solanum lycopersicum
Solyc04g024420.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch04: 31577887-31587886 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471281 5263 Asterids View MSA
123741626 5271 Pentapetalae View MSA
122791529 5272 Eudicot View MSA
122044659 5273 Angiosperm View MSA
121345810 5274 Embryophyte View MSA
123428515 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain