Gene : Solyc12g013650.1 S. lycopersicum ITAG2.4
Defline:  (1 of 14) PF06749 - Protein of unknown function (DUF1218) (DUF1218) Description:  COSII_At1g13380 (Fragment) (AHRD V1 *-*- C0KEY3_SOLDU); contains Interpro domain(s) IPR009606 Protein of unknown function DUF1218
Genomic Order:  567 Name:  ? Solyc12g013650.1
Secondary Identifier:  ? PAC:36147956
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc12g013650.1 0.5kb upstream 0.5kb upstream 2057 true SL2.50ch12: 4494295-4496351 Solanum lycopersicum
Solyc12g013650.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch12: 4494295-4494794 Solanum lycopersicum
Solyc12g013650.1 0.5kb downstream 0.5kb downstream 2057 true SL2.50ch12: 4494795-4496851 Solanum lycopersicum
Solyc12g013650.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch12: 4496352-4496851 Solanum lycopersicum
Solyc12g013650.1 1.0kb upstream 1.0kb upstream 2557 true SL2.50ch12: 4493795-4496351 Solanum lycopersicum
Solyc12g013650.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch12: 4493795-4494794 Solanum lycopersicum
Solyc12g013650.1 1.0kb downstream 1.0kb downstream 2557 true SL2.50ch12: 4494795-4497351 Solanum lycopersicum
Solyc12g013650.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch12: 4496352-4497351 Solanum lycopersicum
Solyc12g013650.1 2.0kb upstream 2.0kb upstream 3557 true SL2.50ch12: 4492795-4496351 Solanum lycopersicum
Solyc12g013650.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch12: 4492795-4494794 Solanum lycopersicum
Solyc12g013650.1 2.0kb downstream 2.0kb downstream 3557 true SL2.50ch12: 4494795-4498351 Solanum lycopersicum
Solyc12g013650.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch12: 4496352-4498351 Solanum lycopersicum
Solyc12g013650.1 5.0kb upstream 5.0kb upstream 6557 true SL2.50ch12: 4489795-4496351 Solanum lycopersicum
Solyc12g013650.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch12: 4489795-4494794 Solanum lycopersicum
Solyc12g013650.1 5.0kb downstream 5.0kb downstream 6557 true SL2.50ch12: 4494795-4501351 Solanum lycopersicum
Solyc12g013650.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch12: 4496352-4501351 Solanum lycopersicum
Solyc12g013650.1 10.0kb upstream 10.0kb upstream 11557 true SL2.50ch12: 4484795-4496351 Solanum lycopersicum
Solyc12g013650.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch12: 4484795-4494794 Solanum lycopersicum
Solyc12g013650.1 10.0kb downstream 10.0kb downstream 11557 true SL2.50ch12: 4494795-4506351 Solanum lycopersicum
Solyc12g013650.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch12: 4496352-4506351 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041273 5273 Angiosperm View MSA
121389378 5263 Asterids View MSA
123742828 5271 Pentapetalae View MSA
122791764 5272 Eudicot View MSA
121349405 5274 Embryophyte View MSA
123381298 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain