Gene : Solyc12g011170.1 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR18896//PTHR18896:SF77 - PHOSPHOLIPASE D // SUBFAMILY NOT NAMED Description:  Phospholipase D (AHRD V1 **** D2E4A5_9ROSI); contains Interpro domain(s) IPR011402 Phospholipase D, plant
Genomic Order:  518 Name:  ? Solyc12g011170.1
Secondary Identifier:  ? PAC:36148492
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum LIPASYN-PWY Solanum lycopersicum pathologic  
Slycopersicum PWY-3561 Solanum lycopersicum pathologic  
Slycopersicum PWY-7039 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc12g011170.1 0.5kb upstream 0.5kb upstream 5371 true SL2.50ch12: 4012935-4018305 Solanum lycopersicum
Solyc12g011170.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch12: 4012935-4013434 Solanum lycopersicum
Solyc12g011170.1 0.5kb downstream 0.5kb downstream 5371 true SL2.50ch12: 4013435-4018805 Solanum lycopersicum
Solyc12g011170.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch12: 4018306-4018805 Solanum lycopersicum
Solyc12g011170.1 1.0kb upstream 1.0kb upstream 5871 true SL2.50ch12: 4012435-4018305 Solanum lycopersicum
Solyc12g011170.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch12: 4012435-4013434 Solanum lycopersicum
Solyc12g011170.1 1.0kb downstream 1.0kb downstream 5871 true SL2.50ch12: 4013435-4019305 Solanum lycopersicum
Solyc12g011170.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch12: 4018306-4019305 Solanum lycopersicum
Solyc12g011170.1 2.0kb upstream 2.0kb upstream 6871 true SL2.50ch12: 4011435-4018305 Solanum lycopersicum
Solyc12g011170.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch12: 4011435-4013434 Solanum lycopersicum
Solyc12g011170.1 2.0kb downstream 2.0kb downstream 6871 true SL2.50ch12: 4013435-4020305 Solanum lycopersicum
Solyc12g011170.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch12: 4018306-4020305 Solanum lycopersicum
Solyc12g011170.1 5.0kb upstream 5.0kb upstream 9871 true SL2.50ch12: 4008435-4018305 Solanum lycopersicum
Solyc12g011170.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch12: 4008435-4013434 Solanum lycopersicum
Solyc12g011170.1 5.0kb downstream 5.0kb downstream 9871 true SL2.50ch12: 4013435-4023305 Solanum lycopersicum
Solyc12g011170.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch12: 4018306-4023305 Solanum lycopersicum
Solyc12g011170.1 10.0kb upstream 10.0kb upstream 14871 true SL2.50ch12: 4003435-4018305 Solanum lycopersicum
Solyc12g011170.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch12: 4003435-4013434 Solanum lycopersicum
Solyc12g011170.1 10.0kb downstream 10.0kb downstream 14871 true SL2.50ch12: 4013435-4028305 Solanum lycopersicum
Solyc12g011170.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch12: 4018306-4028305 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121780184 5273 Angiosperm View MSA
121471087 5263 Asterids View MSA
123745391 5271 Pentapetalae View MSA
122771485 5272 Eudicot View MSA
121051807 5274 Embryophyte View MSA
123428505 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain