Gene : Solyc12g013990.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR23105//PTHR23105:SF51 - RIBOSOMAL PROTEIN L7AE FAMILY MEMBER // SUBFAMILY NOT NAMED Description:  50S ribosomal protein L1 (AHRD V1 ***- B6TB66_MAIZE); contains Interpro domain(s) IPR005878 Ribosomal protein L1, bacterial-type
Genomic Order:  601 Name:  ? Solyc12g013990.1
Secondary Identifier:  ? PAC:36146649
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc12g013990.1 0.5kb upstream 0.5kb upstream 10302 true SL2.50ch12: 4825057-4835358 Solanum lycopersicum
Solyc12g013990.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch12: 4825057-4825556 Solanum lycopersicum
Solyc12g013990.1 0.5kb downstream 0.5kb downstream 10302 true SL2.50ch12: 4825557-4835858 Solanum lycopersicum
Solyc12g013990.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch12: 4835359-4835858 Solanum lycopersicum
Solyc12g013990.1 1.0kb upstream 1.0kb upstream 10802 true SL2.50ch12: 4824557-4835358 Solanum lycopersicum
Solyc12g013990.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch12: 4824557-4825556 Solanum lycopersicum
Solyc12g013990.1 1.0kb downstream 1.0kb downstream 10802 true SL2.50ch12: 4825557-4836358 Solanum lycopersicum
Solyc12g013990.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch12: 4835359-4836358 Solanum lycopersicum
Solyc12g013990.1 2.0kb upstream 2.0kb upstream 11802 true SL2.50ch12: 4823557-4835358 Solanum lycopersicum
Solyc12g013990.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch12: 4823557-4825556 Solanum lycopersicum
Solyc12g013990.1 2.0kb downstream 2.0kb downstream 11802 true SL2.50ch12: 4825557-4837358 Solanum lycopersicum
Solyc12g013990.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch12: 4835359-4837358 Solanum lycopersicum
Solyc12g013990.1 5.0kb upstream 5.0kb upstream 14802 true SL2.50ch12: 4820557-4835358 Solanum lycopersicum
Solyc12g013990.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch12: 4820557-4825556 Solanum lycopersicum
Solyc12g013990.1 5.0kb downstream 5.0kb downstream 14802 true SL2.50ch12: 4825557-4840358 Solanum lycopersicum
Solyc12g013990.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch12: 4835359-4840358 Solanum lycopersicum
Solyc12g013990.1 10.0kb upstream 10.0kb upstream 19802 true SL2.50ch12: 4815557-4835358 Solanum lycopersicum
Solyc12g013990.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch12: 4815557-4825556 Solanum lycopersicum
Solyc12g013990.1 10.0kb downstream 10.0kb downstream 19802 true SL2.50ch12: 4825557-4845358 Solanum lycopersicum
Solyc12g013990.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch12: 4835359-4845358 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475223 5263 Asterids View MSA
123740945 5271 Pentapetalae View MSA
122793380 5272 Eudicot View MSA
122043496 5273 Angiosperm View MSA
121348791 5274 Embryophyte View MSA
123427528 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain