Gene : Solyc12g011020.1 S. lycopersicum ITAG2.4
Defline:  (1 of 2) K01094 - phosphatidylglycerophosphatase GEP4 (GEP4) Description:  Had superfamily (Subfamily iiia) phosphatase (AHRD V1 *-*- B5YDI1_DICT6); contains Interpro domain(s) IPR010021 HAD-superfamily phosphatase, subfamily IIIA
Genomic Order:  503 Name:  ? Solyc12g011020.1
Secondary Identifier:  ? PAC:36146787
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY4FS-7 Solanum lycopersicum pathologic  
Slycopersicum PWY-5269 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc12g011020.1 0.5kb upstream 0.5kb upstream 3578 true SL2.50ch12: 3877790-3881367 Solanum lycopersicum
Solyc12g011020.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch12: 3880868-3881367 Solanum lycopersicum
Solyc12g011020.1 0.5kb downstream 0.5kb downstream 3578 true SL2.50ch12: 3877290-3880867 Solanum lycopersicum
Solyc12g011020.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch12: 3877290-3877789 Solanum lycopersicum
Solyc12g011020.1 1.0kb upstream 1.0kb upstream 4078 true SL2.50ch12: 3877790-3881867 Solanum lycopersicum
Solyc12g011020.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch12: 3880868-3881867 Solanum lycopersicum
Solyc12g011020.1 1.0kb downstream 1.0kb downstream 4078 true SL2.50ch12: 3876790-3880867 Solanum lycopersicum
Solyc12g011020.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch12: 3876790-3877789 Solanum lycopersicum
Solyc12g011020.1 2.0kb upstream 2.0kb upstream 5078 true SL2.50ch12: 3877790-3882867 Solanum lycopersicum
Solyc12g011020.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch12: 3880868-3882867 Solanum lycopersicum
Solyc12g011020.1 2.0kb downstream 2.0kb downstream 5078 true SL2.50ch12: 3875790-3880867 Solanum lycopersicum
Solyc12g011020.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch12: 3875790-3877789 Solanum lycopersicum
Solyc12g011020.1 5.0kb upstream 5.0kb upstream 8078 true SL2.50ch12: 3877790-3885867 Solanum lycopersicum
Solyc12g011020.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch12: 3880868-3885867 Solanum lycopersicum
Solyc12g011020.1 5.0kb downstream 5.0kb downstream 8078 true SL2.50ch12: 3872790-3880867 Solanum lycopersicum
Solyc12g011020.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch12: 3872790-3877789 Solanum lycopersicum
Solyc12g011020.1 10.0kb upstream 10.0kb upstream 13078 true SL2.50ch12: 3877790-3890867 Solanum lycopersicum
Solyc12g011020.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch12: 3880868-3890867 Solanum lycopersicum
Solyc12g011020.1 10.0kb downstream 10.0kb downstream 13078 true SL2.50ch12: 3867790-3880867 Solanum lycopersicum
Solyc12g011020.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch12: 3867790-3877789 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480877 5263 Asterids View MSA
123744955 5271 Pentapetalae View MSA
122787883 5272 Eudicot View MSA
122047314 5273 Angiosperm View MSA
121345007 5274 Embryophyte View MSA
123425553 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain