Gene : Solyc12g014290.1 S. lycopersicum ITAG2.4
Defline:  (1 of 5) K03627 - putative transcription factor (MBF1) Description:  Multiprotein bridging factor 1b (AHRD V1 ***- Q152U8_SOLLC); contains Interpro domain(s) IPR001387 Helix-turn-helix type 3
Genomic Order:  631 Name:  ? Solyc12g014290.1
Secondary Identifier:  ? PAC:36148958
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc12g014290.1 0.5kb upstream 0.5kb upstream 2594 true SL2.50ch12: 5099425-5102018 Solanum lycopersicum
Solyc12g014290.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch12: 5099425-5099924 Solanum lycopersicum
Solyc12g014290.1 0.5kb downstream 0.5kb downstream 2594 true SL2.50ch12: 5099925-5102518 Solanum lycopersicum
Solyc12g014290.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch12: 5102019-5102518 Solanum lycopersicum
Solyc12g014290.1 1.0kb upstream 1.0kb upstream 3094 true SL2.50ch12: 5098925-5102018 Solanum lycopersicum
Solyc12g014290.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch12: 5098925-5099924 Solanum lycopersicum
Solyc12g014290.1 1.0kb downstream 1.0kb downstream 3094 true SL2.50ch12: 5099925-5103018 Solanum lycopersicum
Solyc12g014290.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch12: 5102019-5103018 Solanum lycopersicum
Solyc12g014290.1 2.0kb upstream 2.0kb upstream 4094 true SL2.50ch12: 5097925-5102018 Solanum lycopersicum
Solyc12g014290.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch12: 5097925-5099924 Solanum lycopersicum
Solyc12g014290.1 2.0kb downstream 2.0kb downstream 4094 true SL2.50ch12: 5099925-5104018 Solanum lycopersicum
Solyc12g014290.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch12: 5102019-5104018 Solanum lycopersicum
Solyc12g014290.1 5.0kb upstream 5.0kb upstream 7094 true SL2.50ch12: 5094925-5102018 Solanum lycopersicum
Solyc12g014290.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch12: 5094925-5099924 Solanum lycopersicum
Solyc12g014290.1 5.0kb downstream 5.0kb downstream 7094 true SL2.50ch12: 5099925-5107018 Solanum lycopersicum
Solyc12g014290.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch12: 5102019-5107018 Solanum lycopersicum
Solyc12g014290.1 10.0kb upstream 10.0kb upstream 12094 true SL2.50ch12: 5089925-5102018 Solanum lycopersicum
Solyc12g014290.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch12: 5089925-5099924 Solanum lycopersicum
Solyc12g014290.1 10.0kb downstream 10.0kb downstream 12094 true SL2.50ch12: 5099925-5112018 Solanum lycopersicum
Solyc12g014290.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch12: 5102019-5112018 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121477898 5263 Asterids View MSA
123738727 5271 Pentapetalae View MSA
122792809 5272 Eudicot View MSA
122045533 5273 Angiosperm View MSA
121346970 5274 Embryophyte View MSA
123424283 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain