Gene : Solyc12g015780.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K03027 - DNA-directed RNA polymerases I and III subunit RPAC1 (RPC40, POLR1C) Description:  DNA-directed RNA polymerase subunit D (AHRD V1 ***- A8B9C8_GIALA); contains Interpro domain(s) IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type
Genomic Order:  680 Name:  ? Solyc12g015780.1
Secondary Identifier:  ? PAC:36148946
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc12g015780.1 0.5kb upstream 0.5kb upstream 5166 true SL2.50ch12: 5775862-5781027 Solanum lycopersicum
Solyc12g015780.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch12: 5780528-5781027 Solanum lycopersicum
Solyc12g015780.1 0.5kb downstream 0.5kb downstream 5166 true SL2.50ch12: 5775362-5780527 Solanum lycopersicum
Solyc12g015780.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch12: 5775362-5775861 Solanum lycopersicum
Solyc12g015780.1 1.0kb upstream 1.0kb upstream 5666 true SL2.50ch12: 5775862-5781527 Solanum lycopersicum
Solyc12g015780.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch12: 5780528-5781527 Solanum lycopersicum
Solyc12g015780.1 1.0kb downstream 1.0kb downstream 5666 true SL2.50ch12: 5774862-5780527 Solanum lycopersicum
Solyc12g015780.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch12: 5774862-5775861 Solanum lycopersicum
Solyc12g015780.1 2.0kb upstream 2.0kb upstream 6666 true SL2.50ch12: 5775862-5782527 Solanum lycopersicum
Solyc12g015780.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch12: 5780528-5782527 Solanum lycopersicum
Solyc12g015780.1 2.0kb downstream 2.0kb downstream 6666 true SL2.50ch12: 5773862-5780527 Solanum lycopersicum
Solyc12g015780.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch12: 5773862-5775861 Solanum lycopersicum
Solyc12g015780.1 5.0kb upstream 5.0kb upstream 9666 true SL2.50ch12: 5775862-5785527 Solanum lycopersicum
Solyc12g015780.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch12: 5780528-5785527 Solanum lycopersicum
Solyc12g015780.1 5.0kb downstream 5.0kb downstream 9666 true SL2.50ch12: 5770862-5780527 Solanum lycopersicum
Solyc12g015780.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch12: 5770862-5775861 Solanum lycopersicum
Solyc12g015780.1 10.0kb upstream 10.0kb upstream 14666 true SL2.50ch12: 5775862-5790527 Solanum lycopersicum
Solyc12g015780.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch12: 5780528-5790527 Solanum lycopersicum
Solyc12g015780.1 10.0kb downstream 10.0kb downstream 14666 true SL2.50ch12: 5765862-5780527 Solanum lycopersicum
Solyc12g015780.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch12: 5765862-5775861 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121476373 5263 Asterids View MSA
123738682 5271 Pentapetalae View MSA
122789471 5272 Eudicot View MSA
122043698 5273 Angiosperm View MSA
121344052 5274 Embryophyte View MSA
123424148 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain