Gene : Solyc12g015710.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K03500 - 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] (rsmB, sun) Description:  Ribosomal RNA small subunit methyltransferase B (AHRD V1 ***- D5H7I5_SALRM); contains Interpro domain(s) IPR001678 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p
Genomic Order:  674 Name:  ? Solyc12g015710.1
Secondary Identifier:  ? PAC:36148309
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc12g015710.1 0.5kb upstream 0.5kb upstream 8460 true SL2.50ch12: 5687873-5696332 Solanum lycopersicum
Solyc12g015710.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch12: 5695833-5696332 Solanum lycopersicum
Solyc12g015710.1 0.5kb downstream 0.5kb downstream 8460 true SL2.50ch12: 5687373-5695832 Solanum lycopersicum
Solyc12g015710.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch12: 5687373-5687872 Solanum lycopersicum
Solyc12g015710.1 1.0kb upstream 1.0kb upstream 8960 true SL2.50ch12: 5687873-5696832 Solanum lycopersicum
Solyc12g015710.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch12: 5695833-5696832 Solanum lycopersicum
Solyc12g015710.1 1.0kb downstream 1.0kb downstream 8960 true SL2.50ch12: 5686873-5695832 Solanum lycopersicum
Solyc12g015710.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch12: 5686873-5687872 Solanum lycopersicum
Solyc12g015710.1 2.0kb upstream 2.0kb upstream 9960 true SL2.50ch12: 5687873-5697832 Solanum lycopersicum
Solyc12g015710.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch12: 5695833-5697832 Solanum lycopersicum
Solyc12g015710.1 2.0kb downstream 2.0kb downstream 9960 true SL2.50ch12: 5685873-5695832 Solanum lycopersicum
Solyc12g015710.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch12: 5685873-5687872 Solanum lycopersicum
Solyc12g015710.1 5.0kb upstream 5.0kb upstream 12960 true SL2.50ch12: 5687873-5700832 Solanum lycopersicum
Solyc12g015710.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch12: 5695833-5700832 Solanum lycopersicum
Solyc12g015710.1 5.0kb downstream 5.0kb downstream 12960 true SL2.50ch12: 5682873-5695832 Solanum lycopersicum
Solyc12g015710.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch12: 5682873-5687872 Solanum lycopersicum
Solyc12g015710.1 10.0kb upstream 10.0kb upstream 17960 true SL2.50ch12: 5687873-5705832 Solanum lycopersicum
Solyc12g015710.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch12: 5695833-5705832 Solanum lycopersicum
Solyc12g015710.1 10.0kb downstream 10.0kb downstream 17960 true SL2.50ch12: 5677873-5695832 Solanum lycopersicum
Solyc12g015710.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch12: 5677873-5687872 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470453 5263 Asterids View MSA
123740047 5271 Pentapetalae View MSA
122787436 5272 Eudicot View MSA
122043907 5273 Angiosperm View MSA
121346553 5274 Embryophyte View MSA
123427921 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain