Gene : Solyc12g006340.1 S. lycopersicum ITAG2.4
Description:  Auxin response factor 6 (AHRD V1 ***- C7FFK5_SOLLC); contains Interpro domain(s) IPR003340 Transcriptional factor B3 Genomic Order:  134
Name:  ? Solyc12g006340.1 Secondary Identifier:  ? PAC:36147834
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc12g006340.1 0.5kb upstream 0.5kb upstream 2353 true SL2.50ch12: 857256-859608 Solanum lycopersicum
Solyc12g006340.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch12: 859109-859608 Solanum lycopersicum
Solyc12g006340.1 0.5kb downstream 0.5kb downstream 2353 true SL2.50ch12: 856756-859108 Solanum lycopersicum
Solyc12g006340.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch12: 856756-857255 Solanum lycopersicum
Solyc12g006340.1 1.0kb upstream 1.0kb upstream 2853 true SL2.50ch12: 857256-860108 Solanum lycopersicum
Solyc12g006340.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch12: 859109-860108 Solanum lycopersicum
Solyc12g006340.1 1.0kb downstream 1.0kb downstream 2853 true SL2.50ch12: 856256-859108 Solanum lycopersicum
Solyc12g006340.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch12: 856256-857255 Solanum lycopersicum
Solyc12g006340.1 2.0kb upstream 2.0kb upstream 3853 true SL2.50ch12: 857256-861108 Solanum lycopersicum
Solyc12g006340.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch12: 859109-861108 Solanum lycopersicum
Solyc12g006340.1 2.0kb downstream 2.0kb downstream 3853 true SL2.50ch12: 855256-859108 Solanum lycopersicum
Solyc12g006340.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch12: 855256-857255 Solanum lycopersicum
Solyc12g006340.1 5.0kb upstream 5.0kb upstream 6853 true SL2.50ch12: 857256-864108 Solanum lycopersicum
Solyc12g006340.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch12: 859109-864108 Solanum lycopersicum
Solyc12g006340.1 5.0kb downstream 5.0kb downstream 6853 true SL2.50ch12: 852256-859108 Solanum lycopersicum
Solyc12g006340.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch12: 852256-857255 Solanum lycopersicum
Solyc12g006340.1 10.0kb upstream 10.0kb upstream 11853 true SL2.50ch12: 857256-869108 Solanum lycopersicum
Solyc12g006340.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch12: 859109-869108 Solanum lycopersicum
Solyc12g006340.1 10.0kb downstream 10.0kb downstream 11853 true SL2.50ch12: 847256-859108 Solanum lycopersicum
Solyc12g006340.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch12: 847256-857255 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121372834 5263 Asterids View MSA
123753340 5271 Pentapetalae View MSA
122797865 5272 Eudicot View MSA
122051660 5273 Angiosperm View MSA
121351445 5274 Embryophyte View MSA
123428387 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain