Gene : Solyc12g006210.1 S. lycopersicum ITAG2.4
Defline:  (1 of 36) 3.6.3.14 - H(+)-transporting two-sector ATPase / Mitochondrial ATPase Description:  ATP synthase subunit beta chloroplastic (AHRD V1 *-*- Q8MBF8_9SOLA)
Genomic Order:  121 Name:  ? Solyc12g006210.1
Secondary Identifier:  ? PAC:36146593
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-6126 Solanum lycopersicum pathologic  
Slycopersicum PWY-7219 Solanum lycopersicum pathologic  
Slycopersicum PWY-7229 Solanum lycopersicum pathologic  
Slycopersicum PWY-841 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc12g006210.1 0.5kb upstream 0.5kb upstream 719 true SL2.50ch12: 743405-744123 Solanum lycopersicum
Solyc12g006210.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch12: 743405-743904 Solanum lycopersicum
Solyc12g006210.1 0.5kb downstream 0.5kb downstream 719 true SL2.50ch12: 743905-744623 Solanum lycopersicum
Solyc12g006210.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch12: 744124-744623 Solanum lycopersicum
Solyc12g006210.1 1.0kb upstream 1.0kb upstream 1219 true SL2.50ch12: 742905-744123 Solanum lycopersicum
Solyc12g006210.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch12: 742905-743904 Solanum lycopersicum
Solyc12g006210.1 1.0kb downstream 1.0kb downstream 1219 true SL2.50ch12: 743905-745123 Solanum lycopersicum
Solyc12g006210.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch12: 744124-745123 Solanum lycopersicum
Solyc12g006210.1 2.0kb upstream 2.0kb upstream 2219 true SL2.50ch12: 741905-744123 Solanum lycopersicum
Solyc12g006210.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch12: 741905-743904 Solanum lycopersicum
Solyc12g006210.1 2.0kb downstream 2.0kb downstream 2219 true SL2.50ch12: 743905-746123 Solanum lycopersicum
Solyc12g006210.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch12: 744124-746123 Solanum lycopersicum
Solyc12g006210.1 5.0kb upstream 5.0kb upstream 5219 true SL2.50ch12: 738905-744123 Solanum lycopersicum
Solyc12g006210.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch12: 738905-743904 Solanum lycopersicum
Solyc12g006210.1 5.0kb downstream 5.0kb downstream 5219 true SL2.50ch12: 743905-749123 Solanum lycopersicum
Solyc12g006210.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch12: 744124-749123 Solanum lycopersicum
Solyc12g006210.1 10.0kb upstream 10.0kb upstream 10219 true SL2.50ch12: 733905-744123 Solanum lycopersicum
Solyc12g006210.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch12: 733905-743904 Solanum lycopersicum
Solyc12g006210.1 10.0kb downstream 10.0kb downstream 10219 true SL2.50ch12: 743905-754123 Solanum lycopersicum
Solyc12g006210.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch12: 744124-754123 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121371743 5263 Asterids Singleton cluster - no MSA
123749962 5271 Pentapetalae View MSA
122797810 5272 Eudicot View MSA
122051511 5273 Angiosperm View MSA
121351676 5274 Embryophyte View MSA
123424920 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain