Gene : Solyc12g007020.1 S. lycopersicum ITAG2.4
Defline:  (1 of 9) PF06075 - Plant protein of unknown function (DUF936) (DUF936) Description:  cDNA clone J033084B06 full insert sequence (AHRD V1 *-*- B7ESP0_ORYSJ); contains Interpro domain(s) IPR010341 Protein of unknown function DUF936, plant
Genomic Order:  202 Name:  ? Solyc12g007020.1
Secondary Identifier:  ? PAC:36147249
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc12g007020.1 0.5kb upstream 0.5kb upstream 3696 true SL2.50ch12: 1458584-1462279 Solanum lycopersicum
Solyc12g007020.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch12: 1458584-1459083 Solanum lycopersicum
Solyc12g007020.1 0.5kb downstream 0.5kb downstream 3696 true SL2.50ch12: 1459084-1462779 Solanum lycopersicum
Solyc12g007020.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch12: 1462280-1462779 Solanum lycopersicum
Solyc12g007020.1 1.0kb upstream 1.0kb upstream 4196 true SL2.50ch12: 1458084-1462279 Solanum lycopersicum
Solyc12g007020.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch12: 1458084-1459083 Solanum lycopersicum
Solyc12g007020.1 1.0kb downstream 1.0kb downstream 4196 true SL2.50ch12: 1459084-1463279 Solanum lycopersicum
Solyc12g007020.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch12: 1462280-1463279 Solanum lycopersicum
Solyc12g007020.1 2.0kb upstream 2.0kb upstream 5196 true SL2.50ch12: 1457084-1462279 Solanum lycopersicum
Solyc12g007020.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch12: 1457084-1459083 Solanum lycopersicum
Solyc12g007020.1 2.0kb downstream 2.0kb downstream 5196 true SL2.50ch12: 1459084-1464279 Solanum lycopersicum
Solyc12g007020.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch12: 1462280-1464279 Solanum lycopersicum
Solyc12g007020.1 5.0kb upstream 5.0kb upstream 8196 true SL2.50ch12: 1454084-1462279 Solanum lycopersicum
Solyc12g007020.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch12: 1454084-1459083 Solanum lycopersicum
Solyc12g007020.1 5.0kb downstream 5.0kb downstream 8196 true SL2.50ch12: 1459084-1467279 Solanum lycopersicum
Solyc12g007020.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch12: 1462280-1467279 Solanum lycopersicum
Solyc12g007020.1 10.0kb upstream 10.0kb upstream 13196 true SL2.50ch12: 1449084-1462279 Solanum lycopersicum
Solyc12g007020.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch12: 1449084-1459083 Solanum lycopersicum
Solyc12g007020.1 10.0kb downstream 10.0kb downstream 13196 true SL2.50ch12: 1459084-1472279 Solanum lycopersicum
Solyc12g007020.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch12: 1462280-1472279 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473722 5263 Asterids View MSA
123740189 5271 Pentapetalae View MSA
122787334 5272 Eudicot View MSA
122050076 5273 Angiosperm View MSA
121350805 5274 Embryophyte View MSA
123381891 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain