Gene : Solyc12g006830.1 S. lycopersicum ITAG2.4
Defline:  (1 of 2) KOG1757 - Histone 2A Description:  Histone H2A (AHRD V1 ***- C6T0M0_SOYBN); contains Interpro domain(s) IPR002119 Histone H2A
Genomic Order:  183 Name:  ? Solyc12g006830.1
Secondary Identifier:  ? PAC:36146613
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc12g006830.1 0.5kb upstream 0.5kb upstream 3779 true SL2.50ch12: 1248331-1252109 Solanum lycopersicum
Solyc12g006830.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch12: 1251610-1252109 Solanum lycopersicum
Solyc12g006830.1 0.5kb downstream 0.5kb downstream 3779 true SL2.50ch12: 1247831-1251609 Solanum lycopersicum
Solyc12g006830.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch12: 1247831-1248330 Solanum lycopersicum
Solyc12g006830.1 1.0kb upstream 1.0kb upstream 4279 true SL2.50ch12: 1248331-1252609 Solanum lycopersicum
Solyc12g006830.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch12: 1251610-1252609 Solanum lycopersicum
Solyc12g006830.1 1.0kb downstream 1.0kb downstream 4279 true SL2.50ch12: 1247331-1251609 Solanum lycopersicum
Solyc12g006830.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch12: 1247331-1248330 Solanum lycopersicum
Solyc12g006830.1 2.0kb upstream 2.0kb upstream 5279 true SL2.50ch12: 1248331-1253609 Solanum lycopersicum
Solyc12g006830.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch12: 1251610-1253609 Solanum lycopersicum
Solyc12g006830.1 2.0kb downstream 2.0kb downstream 5279 true SL2.50ch12: 1246331-1251609 Solanum lycopersicum
Solyc12g006830.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch12: 1246331-1248330 Solanum lycopersicum
Solyc12g006830.1 5.0kb upstream 5.0kb upstream 8279 true SL2.50ch12: 1248331-1256609 Solanum lycopersicum
Solyc12g006830.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch12: 1251610-1256609 Solanum lycopersicum
Solyc12g006830.1 5.0kb downstream 5.0kb downstream 8279 true SL2.50ch12: 1243331-1251609 Solanum lycopersicum
Solyc12g006830.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch12: 1243331-1248330 Solanum lycopersicum
Solyc12g006830.1 10.0kb upstream 10.0kb upstream 13279 true SL2.50ch12: 1248331-1261609 Solanum lycopersicum
Solyc12g006830.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch12: 1251610-1261609 Solanum lycopersicum
Solyc12g006830.1 10.0kb downstream 10.0kb downstream 13279 true SL2.50ch12: 1238331-1251609 Solanum lycopersicum
Solyc12g006830.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch12: 1238331-1248330 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469455 5263 Asterids View MSA
123749587 5271 Pentapetalae View MSA
122785634 5272 Eudicot View MSA
122050961 5273 Angiosperm View MSA
121349814 5274 Embryophyte View MSA
123424347 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain