Gene : Solyc12g005220.1 S. lycopersicum ITAG2.4
Defline:  (1 of 3) PTHR22957//PTHR22957:SF276 - TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN // SUBFAMILY NOT NAMED Description:  TBC1 domain family member 17 (AHRD V1 *--- Q0V9K4_XENTR); contains Interpro domain(s) IPR000195 RabGAP/TBC
Genomic Order:  23 Name:  ? Solyc12g005220.1
Secondary Identifier:  ? PAC:36147924
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc12g005220.1 0.5kb upstream 0.5kb upstream 5785 true SL2.50ch12: 140522-146306 Solanum lycopersicum
Solyc12g005220.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch12: 140522-141021 Solanum lycopersicum
Solyc12g005220.1 0.5kb downstream 0.5kb downstream 5785 true SL2.50ch12: 141022-146806 Solanum lycopersicum
Solyc12g005220.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch12: 146307-146806 Solanum lycopersicum
Solyc12g005220.1 1.0kb upstream 1.0kb upstream 6285 true SL2.50ch12: 140022-146306 Solanum lycopersicum
Solyc12g005220.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch12: 140022-141021 Solanum lycopersicum
Solyc12g005220.1 1.0kb downstream 1.0kb downstream 6285 true SL2.50ch12: 141022-147306 Solanum lycopersicum
Solyc12g005220.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch12: 146307-147306 Solanum lycopersicum
Solyc12g005220.1 2.0kb upstream 2.0kb upstream 7285 true SL2.50ch12: 139022-146306 Solanum lycopersicum
Solyc12g005220.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch12: 139022-141021 Solanum lycopersicum
Solyc12g005220.1 2.0kb downstream 2.0kb downstream 7285 true SL2.50ch12: 141022-148306 Solanum lycopersicum
Solyc12g005220.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch12: 146307-148306 Solanum lycopersicum
Solyc12g005220.1 5.0kb upstream 5.0kb upstream 10285 true SL2.50ch12: 136022-146306 Solanum lycopersicum
Solyc12g005220.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch12: 136022-141021 Solanum lycopersicum
Solyc12g005220.1 5.0kb downstream 5.0kb downstream 10285 true SL2.50ch12: 141022-151306 Solanum lycopersicum
Solyc12g005220.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch12: 146307-151306 Solanum lycopersicum
Solyc12g005220.1 10.0kb upstream 10.0kb upstream 15285 true SL2.50ch12: 131022-146306 Solanum lycopersicum
Solyc12g005220.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch12: 131022-141021 Solanum lycopersicum
Solyc12g005220.1 10.0kb downstream 10.0kb downstream 15285 true SL2.50ch12: 141022-156306 Solanum lycopersicum
Solyc12g005220.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch12: 146307-156306 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121385202 5263 Asterids View MSA
123749746 5271 Pentapetalae View MSA
122789971 5272 Eudicot View MSA
122046428 5273 Angiosperm View MSA
121350403 5274 Embryophyte View MSA
123428253 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain